Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040182.1-P | Field mustard | plasma membrane | 99.61 | 99.61 |
| CDX90446 | Canola | cytosol | 77.43 | 94.76 |
| CDY54781 | Canola | plasma membrane | 92.22 | 92.22 |
| AT4G17790.1 | Thale cress | plasma membrane | 85.6 | 83.33 |
| HORVU2Hr1G054810.1 | Barley | endoplasmic reticulum, extracellular | 33.07 | 78.7 |
| HORVU7Hr1G023440.1 | Barley | endoplasmic reticulum, plasma membrane | 54.09 | 78.09 |
| VIT_02s0012g01630.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 77.04 | 77.95 |
| KRH39560 | Soybean | plasma membrane | 77.04 | 76.74 |
| GSMUA_Achr4P19040_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 71.21 | 73.79 |
| GSMUA_Achr4P12280_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 68.48 | 72.13 |
| GSMUA_Achr4P27330_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 70.43 | 71.26 |
| Solyc08g076670.2.1 | Tomato | plasma membrane | 75.88 | 70.65 |
| Os02t0693500-01 | Rice | plasma membrane | 70.04 | 70.59 |
| PGSC0003DMT400045191 | Potato | plasma membrane | 75.49 | 70.29 |
| GSMUA_Achr9P23350_001 | Banana | mitochondrion, plasma membrane | 66.54 | 70.08 |
| KRH74398 | Soybean | golgi, peroxisome, plasma membrane | 77.82 | 69.44 |
| TraesCS2D01G446700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 67.7 | 68.5 |
| TraesCS2B01G468200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 67.7 | 68.5 |
| Os04t0592600-01 | Rice | plasma membrane, vacuole | 67.7 | 68.5 |
| Zm00001d000439_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 67.32 | 68.11 |
| TraesCS2A01G447800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 67.32 | 68.11 |
| EES12761 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 66.54 | 67.32 |
| HORVU7Hr1G051100.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 65.37 | 66.14 |
| EES05689 | Sorghum | plasma membrane | 64.59 | 65.35 |
| Zm00001d017689_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 63.42 | 64.17 |
| CDY01492 | Canola | plasma membrane | 40.86 | 63.64 |
| CDY01491 | Canola | golgi, peroxisome, plasma membrane | 54.47 | 59.32 |
| CDX72847 | Canola | plasma membrane | 61.48 | 58.09 |
| CDX96363 | Canola | plasma membrane | 61.09 | 57.72 |
| HORVU2Hr1G049420.14 | Barley | cytosol, plastid | 66.54 | 55.88 |
| CDX82201 | Canola | peroxisome | 59.53 | 55.43 |
| CDX75108 | Canola | plasma membrane | 57.98 | 54.18 |
| CDY48052 | Canola | plasma membrane | 57.59 | 53.82 |
| Zm00001d026194_P003 | Maize | plasma membrane | 43.97 | 43.8 |
| CDY03670 | Canola | peroxisome | 33.85 | 42.23 |
| HORVU7Hr1G044670.7 | Barley | plasma membrane | 22.96 | 38.82 |
| CDY36672 | Canola | cytosol, nucleus, plasma membrane | 59.92 | 34.0 |
| CDX68293 | Canola | cytosol, nucleus, plasma membrane, plastid | 60.31 | 33.62 |
Protein Annotations
| EnsemblPlants:CDX78801 | EnsemblPlantsGene:GSBRNA2T00131268001 | GO:A0A078CNL1 | InterPro:SNARE_assoc | PANTHER:PTHR43220 | PANTHER:PTHR43220:SF6 |
| PFAM:PF09335 | ProteinID:CDX78801 | ProteinID:CDX78801.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE969D |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA01g08680D
Coordinates
chrLK031816:+:119149..120527
Molecular Weight (calculated)
28389.4 Da
IEP (calculated)
8.284
GRAVY (calculated)
0.695
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MEREGETTIG EVAPATPRRC SLSFWEVTTA SVVVLGFLVG LLCVYLTMPQ SDYSFLKLPR NLQDLQILRD NLEIYTSDYT VQVLVGYCLV YVFMQTFMIP
101: GTVFMSLLAG ALFGVIKGMA LVVSTATAGA SSCFFLSKLI GRPLIFSLWP DKLIFFQDQV ARRKDGLLNY MLFLRLTPTL PNTFINVASP IVDVPYHIFF
201: LATFIGLIPA AYVTVRAGIA LGELKSLGDL YDFSSMATLF LIGVLSVTPT LISKKKV
101: GTVFMSLLAG ALFGVIKGMA LVVSTATAGA SSCFFLSKLI GRPLIFSLWP DKLIFFQDQV ARRKDGLLNY MLFLRLTPTL PNTFINVASP IVDVPYHIFF
201: LATFIGLIPA AYVTVRAGIA LGELKSLGDL YDFSSMATLF LIGVLSVTPT LISKKKV
001: MEKEEGETTT TIGVVPAAPA KLPTPIYSLS FWEVTAASGV VLGFILGLVC VYLTMPQSDY SFLKLPRNLE DLQILRDNLE IYTSDYTVQV LVGYCLVYVF
101: MQTFMIPGTV FMSLLAGALF GVVKGMALVV STATAGASSC YFLSKLIGRP LLFSLWPDKL VFFQDQVARR KDRLLNYMLF LRLTPTLPNT FINVASPIVD
201: VPYHIFFLAT FIGLIPAAFV TVRAGLALGE LKSLGDLYDF SSMATLCLIG VLSVTPTLIG KKQA
101: MQTFMIPGTV FMSLLAGALF GVVKGMALVV STATAGASSC YFLSKLIGRP LLFSLWPDKL VFFQDQVARR KDRLLNYMLF LRLTPTLPNT FINVASPIVD
201: VPYHIFFLAT FIGLIPAAFV TVRAGLALGE LKSLGDLYDF SSMATLCLIG VLSVTPTLIG KKQA
Arabidopsis Description
SNARE associated Golgi protein family [Source:UniProtKB/TrEMBL;Acc:O23619]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.