Factsheet for HORVU2Hr1G049420.14

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G023440.1	Barley	endoplasmic reticulum, plasma membrane	55.23	94.94
HORVU2Hr1G054810.1	Barley	endoplasmic reticulum, extracellular	33.33	94.44
TraesCS2B01G468200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	77.78	93.7
TraesCS2D01G446700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	77.45	93.31
TraesCS2A01G447800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	77.12	92.91
HORVU7Hr1G051100.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	75.82	91.34
Zm00001d000439_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	72.55	87.4
Os04t0592600-01	Rice	plasma membrane, vacuole	72.55	87.4
EES12761	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	71.9	86.61
Bra012640.1-P	Field mustard	cytosol	50.98	74.29
CDX90446	Canola	cytosol	50.98	74.29
GSMUA_Achr4P19040_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	59.48	73.39
GSMUA_Achr4P27330_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	58.82	70.87
VIT_02s0012g01630.t01	Wine grape	peroxisome, plasma membrane, vacuole	58.5	70.47
GSMUA_Achr4P12280_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	55.23	69.26
GSMUA_Achr9P23350_001	Banana	mitochondrion, plasma membrane	54.58	68.44
KRH39560	Soybean	plasma membrane	57.19	67.83
Bra040182.1-P	Field mustard	plasma membrane	56.21	66.93
CDX78801	Canola	plasma membrane	55.88	66.54
CDY54781	Canola	plasma membrane	55.23	65.76
PGSC0003DMT400045191	Potato	plasma membrane	57.84	64.13
Solyc08g076670.2.1	Tomato	plasma membrane	57.84	64.13
AT4G17790.1	Thale cress	plasma membrane	54.58	63.26
KRH74398	Soybean	golgi, peroxisome, plasma membrane	58.17	61.81
HORVU4Hr1G006740.1	Barley	endoplasmic reticulum, plasma membrane	44.77	56.61
HORVU7Hr1G044670.7	Barley	plasma membrane	25.82	51.97
CDY01492	Canola	plasma membrane	27.12	50.3
CDY01491	Canola	golgi, peroxisome, plasma membrane	35.29	45.76

Protein Annotations

EnsemblPlants:HORVU2Hr1G049420.14	EnsemblPlantsGene:HORVU2Hr1G049420	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:SNARE_assoc
PANTHER:PTHR43220	PANTHER:PTHR43220:SF6	PFAM:PF09335	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B46AB88
UniProt:A0A287HYQ4	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:281639010..281644427

Molecular Weight (calculated)

32938.4 Da

IEP (calculated)

8.054

GRAVY (calculated)

0.506

Length

306 amino acids

Sequence
(BLAST)

001: NISKYSDHVL DLYSNTAAAP DSPCLSRISI VLPSAPRLAR TAAGFPQEGG GGGGREDRFP LLEAALGAGV AAVFTAGLVG VYLSMPDSDY SFLKLPRNLH
101: ELQILTGHVE NYTSDYTVQV LIGYCVVYIF MQTFMIPGTI FMSLLAGALF GQLQGVALVV FAASAGASSC YFLSKLIGKP LVFVLWPDKL MFFRKQVAKR
201: REKLLNYMLF LRVTPTLPNT FINLASHIVN VPFHTFLLAT LIGLIPAAYV TVRAGIALGE LTSLSDLYDT QSVALLFLIG VVSVTPALPR KDEVQEKAPE
301: IAAGAS

Best Arabidopsis Sequence Match ( AT4G17790.1 )
(BLAST)

001: MEKEEGETTT TIGVVPAAPA KLPTPIYSLS FWEVTAASGV VLGFILGLVC VYLTMPQSDY SFLKLPRNLE DLQILRDNLE IYTSDYTVQV LVGYCLVYVF
101: MQTFMIPGTV FMSLLAGALF GVVKGMALVV STATAGASSC YFLSKLIGRP LLFSLWPDKL VFFQDQVARR KDRLLNYMLF LRLTPTLPNT FINVASPIVD
201: VPYHIFFLAT FIGLIPAAFV TVRAGLALGE LKSLGDLYDF SSMATLCLIG VLSVTPTLIG KKQA

Arabidopsis Description

SNARE associated Golgi protein family [Source:UniProtKB/TrEMBL;Acc:O23619]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.