Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G023440.1 | Barley | endoplasmic reticulum, plasma membrane | 67.32 | 96.07 |
| TraesCS2B01G468200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 94.88 | 94.88 |
| TraesCS2D01G446700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 94.49 | 94.49 |
| TraesCS2A01G447800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 94.09 | 94.09 |
| HORVU2Hr1G054810.1 | Barley | endoplasmic reticulum, extracellular | 39.76 | 93.52 |
| Zm00001d000439_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 88.19 | 88.19 |
| Os04t0592600-01 | Rice | plasma membrane, vacuole | 87.8 | 87.8 |
| EES12761 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 87.4 | 87.4 |
| HORVU2Hr1G049420.14 | Barley | cytosol, plastid | 91.34 | 75.82 |
| Bra012640.1-P | Field mustard | cytosol | 61.02 | 73.81 |
| CDX90446 | Canola | cytosol | 61.02 | 73.81 |
| GSMUA_Achr4P19040_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 72.05 | 73.79 |
| VIT_02s0012g01630.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 70.47 | 70.47 |
| GSMUA_Achr4P27330_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 70.08 | 70.08 |
| GSMUA_Achr4P12280_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 65.75 | 68.44 |
| GSMUA_Achr9P23350_001 | Banana | mitochondrion, plasma membrane | 64.96 | 67.62 |
| KRH39560 | Soybean | plasma membrane | 67.32 | 66.28 |
| Bra040182.1-P | Field mustard | plasma membrane | 66.54 | 65.76 |
| CDX78801 | Canola | plasma membrane | 66.14 | 65.37 |
| CDY54781 | Canola | plasma membrane | 65.75 | 64.98 |
| PGSC0003DMT400045191 | Potato | plasma membrane | 67.72 | 62.32 |
| Solyc08g076670.2.1 | Tomato | plasma membrane | 67.72 | 62.32 |
| AT4G17790.1 | Thale cress | plasma membrane | 64.57 | 62.12 |
| KRH74398 | Soybean | golgi, peroxisome, plasma membrane | 67.72 | 59.72 |
| HORVU4Hr1G006740.1 | Barley | endoplasmic reticulum, plasma membrane | 53.54 | 56.2 |
| HORVU7Hr1G044670.7 | Barley | plasma membrane | 31.89 | 53.29 |
| CDY01492 | Canola | plasma membrane | 32.68 | 50.3 |
| CDY01491 | Canola | golgi, peroxisome, plasma membrane | 41.34 | 44.49 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G051100.2 | EnsemblPlantsGene:HORVU7Hr1G051100 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:SNARE_assoc |
| PANTHER:PTHR43220 | PANTHER:PTHR43220:SF6 | PFAM:PF09335 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B47B7CB |
| UniProt:A0A287WGE3 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:190137664..190139804
Molecular Weight (calculated)
27786.5 Da
IEP (calculated)
7.559
GRAVY (calculated)
0.658
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MGREDRFPLW EAALGAGVAA VFAAVLVGVY LSMLDSDYSF LKLPRNLHEL QILTGHLENY TSDYTVQVLI GYCDVYIFMQ TFMIPGTIFM SLLVGALFGQ
101: LRGVALVVFA ASAGASSCYF LSKLIGKPLV FMLWPDKLTF YQKHVAKRRE KLLNYMLFLR VTPTLPNTFI NLASPMVDVL FHTFLLATLI GLIPAAYVTV
201: RAGIALGELT SLSDLYDTQS VALLFLIGVV SVTPALLSKD KAQEKAPEIA AGAS
101: LRGVALVVFA ASAGASSCYF LSKLIGKPLV FMLWPDKLTF YQKHVAKRRE KLLNYMLFLR VTPTLPNTFI NLASPMVDVL FHTFLLATLI GLIPAAYVTV
201: RAGIALGELT SLSDLYDTQS VALLFLIGVV SVTPALLSKD KAQEKAPEIA AGAS
001: MAPTRILTRD EELGVISDDD DSPSGKRSKL DRFPLSRWEL AVSLGVFLVF SSGLCCIYMT MPAAEFGKLK LPRSLADLRL LKDNLANYAN EYPAQFVLGY
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE
Arabidopsis Description
SNARE associated Golgi protein family [Source:UniProtKB/TrEMBL;Acc:F4IBM1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.