Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G054810.1 | Barley | endoplasmic reticulum, extracellular | 59.55 | 98.15 |
| TraesCS2D01G446700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 98.31 | 68.9 |
| TraesCS2B01G468200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 98.31 | 68.9 |
| TraesCS2A01G447800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 97.75 | 68.5 |
| HORVU7Hr1G051100.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 96.07 | 67.32 |
| Bra012640.1-P | Field mustard | cytosol | 76.4 | 64.76 |
| CDX90446 | Canola | cytosol | 76.4 | 64.76 |
| Zm00001d000439_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 92.13 | 64.57 |
| Os04t0592600-01 | Rice | plasma membrane, vacuole | 92.13 | 64.57 |
| EES12761 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 92.13 | 64.57 |
| GSMUA_Achr4P19040_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 83.71 | 60.08 |
| VIT_02s0012g01630.t01 | Wine grape | peroxisome, plasma membrane, vacuole | 82.58 | 57.87 |
| GSMUA_Achr4P27330_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 80.9 | 56.69 |
| GSMUA_Achr4P12280_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 77.53 | 56.56 |
| HORVU2Hr1G049420.14 | Barley | cytosol, plastid | 94.94 | 55.23 |
| GSMUA_Achr9P23350_001 | Banana | mitochondrion, plasma membrane | 75.28 | 54.92 |
| Bra040182.1-P | Field mustard | plasma membrane | 78.09 | 54.09 |
| CDX78801 | Canola | plasma membrane | 78.09 | 54.09 |
| CDY54781 | Canola | plasma membrane | 78.09 | 54.09 |
| KRH39560 | Soybean | plasma membrane | 78.09 | 53.88 |
| PGSC0003DMT400045191 | Potato | plasma membrane | 81.46 | 52.54 |
| Solyc08g076670.2.1 | Tomato | plasma membrane | 81.46 | 52.54 |
| AT4G17790.1 | Thale cress | plasma membrane | 76.97 | 51.89 |
| HORVU4Hr1G006740.1 | Barley | endoplasmic reticulum, plasma membrane | 66.85 | 49.17 |
| KRH74398 | Soybean | golgi, peroxisome, plasma membrane | 78.09 | 48.26 |
| CDY01492 | Canola | plasma membrane | 42.7 | 46.06 |
| CDY01491 | Canola | golgi, peroxisome, plasma membrane | 42.13 | 31.78 |
| HORVU7Hr1G044670.7 | Barley | plasma membrane | 17.98 | 21.05 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G023440.1 | EnsemblPlantsGene:HORVU7Hr1G023440 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:SNARE_assoc |
| PANTHER:PTHR43220 | PANTHER:PTHR43220:SF6 | PFAM:PF09335 | TMHMM:TMhelix | UniParc:UPI000B48567B | UniProt:A0A287VPR6 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr7H:-:35610299..35611164
Molecular Weight (calculated)
19512.4 Da
IEP (calculated)
9.031
GRAVY (calculated)
0.849
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: GHLENYTSDY TVQVLIGYCA VYIFMQTFMI PGTIFMSLLV GALFGQLRGV ALVVFAASAG ASSCYFLSKL IGKPLVFVLW PDKLTFFQKQ VAKRREKLLN
101: YMLFLRVTPT LPNTFINLAS PIVDVPFHTF LLATLIGLIP AAYVTVRAGI ALGELTSLSD LYDTQSVALL FLIGVVSS
101: YMLFLRVTPT LPNTFINLAS PIVDVPFHTF LLATLIGLIP AAYVTVRAGI ALGELTSLSD LYDTQSVALL FLIGVVSS
001: MAPTRILTRD EELGVISDDD DSPSGKRSKL DRFPLSRWEL AVSLGVFLVF SSGLCCIYMT MPAAEFGKLK LPRSLADLRL LKDNLANYAN EYPAQFVLGY
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE
Arabidopsis Description
SNARE associated Golgi protein family [Source:UniProtKB/TrEMBL;Acc:F4IBM1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.