Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90446 | Canola | cytosol | 50.0 | 56.19 |
| CDY54781 | Canola | plasma membrane | 60.59 | 55.64 |
| CDX78801 | Canola | plasma membrane | 59.32 | 54.47 |
| GSMUA_Achr4P19040_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 50.0 | 47.58 |
| GSMUA_Achr9P23350_001 | Banana | mitochondrion, plasma membrane | 47.46 | 45.9 |
| GSMUA_Achr4P27330_001 | Banana | endoplasmic reticulum, plasma membrane, vacuole | 47.88 | 44.49 |
| GSMUA_Achr4P12280_001 | Banana | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 45.34 | 43.85 |
| Os02t0693500-01 | Rice | plasma membrane | 46.61 | 43.14 |
| TraesCS2D01G446700.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 46.19 | 42.91 |
| TraesCS2B01G468200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 46.19 | 42.91 |
| TraesCS2A01G447800.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 45.76 | 42.52 |
| Os04t0592600-01 | Rice | plasma membrane, vacuole | 45.76 | 42.52 |
| HORVU7Hr1G023440.1 | Barley | endoplasmic reticulum, plasma membrane | 31.78 | 42.13 |
| EES12761 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 45.34 | 42.13 |
| Zm00001d000439_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 45.34 | 42.13 |
| HORVU7Hr1G051100.2 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 44.49 | 41.34 |
| EES05689 | Sorghum | plasma membrane | 42.8 | 39.76 |
| Zm00001d017689_P002 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 42.8 | 39.76 |
| Zm00001d026194_P003 | Maize | plasma membrane | 43.22 | 39.53 |
| CDX96363 | Canola | plasma membrane | 43.64 | 37.87 |
| CDX72847 | Canola | plasma membrane | 43.64 | 37.87 |
| CDX82201 | Canola | peroxisome | 41.95 | 35.87 |
| HORVU2Hr1G049420.14 | Barley | cytosol, plastid | 45.76 | 35.29 |
| CDX75108 | Canola | plasma membrane | 41.1 | 35.27 |
| CDY48052 | Canola | plasma membrane | 40.68 | 34.91 |
| HORVU7Hr1G044670.7 | Barley | plasma membrane | 22.46 | 34.87 |
| HORVU2Hr1G054810.1 | Barley | endoplasmic reticulum, extracellular | 14.41 | 31.48 |
| CDY36672 | Canola | cytosol, nucleus, plasma membrane | 43.22 | 22.52 |
| CDX68293 | Canola | cytosol, nucleus, plasma membrane, plastid | 43.22 | 22.13 |
| CDY03670 | Canola | peroxisome | 18.64 | 21.36 |
| CDY01492 | Canola | plasma membrane | 10.59 | 15.15 |
Protein Annotations
| EnsemblPlants:CDY01491 | EnsemblPlantsGene:GSBRNA2T00112501001 | GO:A0A078EK32 | PANTHER:PTHR43220 | PANTHER:PTHR43220:SF6 | ProteinID:CDY01491 |
| ProteinID:CDY01491.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE8789 | MapMan:35.1 | : |
Description
BnaC07g34810D
Coordinates
chrLK031927:+:118676..119560
Molecular Weight (calculated)
26035.4 Da
IEP (calculated)
9.581
GRAVY (calculated)
0.522
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MERGGGRGGE GGETTICDVN PPTPTKSVTP RYSLSFWEVT AASGVVLGFL IGLVCVYLTM PQSDYSFLKL PRNLHDLQIL RDNLEIYTSD YTVQVLVGYS
101: LVYVFMQTFM IPGTVFMSLL AGALFGVFKG MALVVSTATA GASSCFLLSK LIGRPLIFSL WPDKLVFFQI TSIRKRKEFP FLQALWPPLS LLKSALSLLF
201: LGLRSSLHLL GIGPVLGRAW LMAIHSMIYN TPPWMP
101: LVYVFMQTFM IPGTVFMSLL AGALFGVFKG MALVVSTATA GASSCFLLSK LIGRPLIFSL WPDKLVFFQI TSIRKRKEFP FLQALWPPLS LLKSALSLLF
201: LGLRSSLHLL GIGPVLGRAW LMAIHSMIYN TPPWMP
001: MAPTRILTRD EELGVISDDD DSPSGKRSKL DRFPLSRWEL AVSLGVFLVF SSGLCCIYMT MPAAEFGKLK LPRSLADLRL LKDNLANYAN EYPAQFVLGY
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE
Arabidopsis Description
SNARE associated Golgi protein family [Source:UniProtKB/TrEMBL;Acc:F4IBM1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.