Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007997.1-P | Field mustard | plasma membrane | 99.51 | 99.51 |
| CDX82201 | Canola | peroxisome | 87.86 | 65.58 |
| CDX96363 | Canola | plasma membrane | 83.5 | 63.24 |
| CDX72847 | Canola | plasma membrane | 83.01 | 62.87 |
| VIT_18s0072g01050.t01 | Wine grape | cytosol, golgi, peroxisome | 68.45 | 50.54 |
| AT1G71940.2 | Thale cress | plasma membrane | 73.79 | 49.67 |
| Solyc06g065400.2.1 | Tomato | plasma membrane | 67.96 | 49.65 |
| CDX75108 | Canola | plasma membrane | 66.02 | 49.45 |
| PGSC0003DMT400067170 | Potato | plasma membrane | 67.48 | 49.29 |
| CDY48052 | Canola | plasma membrane | 65.53 | 49.09 |
| KRG91806 | Soybean | plasma membrane | 64.08 | 48.71 |
| KRH34979 | Soybean | nucleus, peroxisome, plasma membrane | 62.62 | 47.6 |
| PGSC0003DMT400002299 | Potato | golgi, peroxisome, plasma membrane | 64.56 | 46.67 |
| GSMUA_Achr6P04140_001 | Banana | plasma membrane | 58.74 | 44.32 |
| GSMUA_Achr6P06250_001 | Banana | plasma membrane | 58.25 | 43.96 |
| GSMUA_Achr7P11860_001 | Banana | peroxisome | 58.25 | 43.32 |
| CDY36672 | Canola | cytosol, nucleus, plasma membrane | 87.86 | 39.96 |
| HORVU4Hr1G006740.1 | Barley | endoplasmic reticulum, plasma membrane | 46.6 | 39.67 |
| Solyc11g018620.1.1 | Tomato | endoplasmic reticulum, plasma membrane | 65.53 | 39.47 |
| EER93600 | Sorghum | peroxisome, plasma membrane, plastid | 51.46 | 37.99 |
| Zm00001d033664_P001 | Maize | peroxisome | 50.49 | 37.55 |
| Os03t0703900-01 | Rice | peroxisome | 48.54 | 36.1 |
| TraesCS4A01G272200.1 | Wheat | plasma membrane | 49.03 | 36.07 |
| TraesCS4B01G041800.1 | Wheat | plasma membrane | 49.03 | 35.94 |
| TraesCS4D01G039000.1 | Wheat | plasma membrane | 49.03 | 35.82 |
| CDX68293 | Canola | cytosol, nucleus, plasma membrane, plastid | 79.13 | 35.36 |
| CDY01492 | Canola | plasma membrane | 27.67 | 34.55 |
| CDY54781 | Canola | plasma membrane | 42.72 | 34.24 |
| CDX78801 | Canola | plasma membrane | 42.23 | 33.85 |
| CDX90446 | Canola | cytosol | 33.01 | 32.38 |
| CDY01491 | Canola | golgi, peroxisome, plasma membrane | 21.36 | 18.64 |
Protein Annotations
| EnsemblPlants:CDY03670 | EnsemblPlantsGene:GSBRNA2T00116456001 | GO:A0A078ENZ4 | PANTHER:PTHR43220 | PANTHER:PTHR43220:SF3 | ProteinID:CDY03670 |
| ProteinID:CDY03670.1 | TMHMM:TMhelix | UniParc:UPI0004EDB3FF | MapMan:35.1 | : | : |
Description
BnaA02g15670D
Coordinates
chrLK031945:-:341158..342270
Molecular Weight (calculated)
23033.3 Da
IEP (calculated)
8.654
GRAVY (calculated)
0.216
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKIDFSFDP CMHSVMAPTR NLIRDEELGT ISDEDDSPSG KRSKLDRFPL SRWELAVSLG VFLVFSSGLF CIYITMPSAE FGKLKLPRSI SDLRLLKDNL
101: ANYANEYPEP ANNARTKLLE KGITPTLPNL FINLASPIVD VPFHVFFLAT LVGLIPAAYI TVRAGLAIGD LKSVKDLYDF KTLSVLFLIG FISILPTILK
201: RKKIYE
101: ANYANEYPEP ANNARTKLLE KGITPTLPNL FINLASPIVD VPFHVFFLAT LVGLIPAAYI TVRAGLAIGD LKSVKDLYDF KTLSVLFLIG FISILPTILK
201: RKKIYE
001: MAPTRILTRD EELGVISDDD DSPSGKRSKL DRFPLSRWEL AVSLGVFLVF SSGLCCIYMT MPAAEFGKLK LPRSLADLRL LKDNLANYAN EYPAQFVLGY
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE
Arabidopsis Description
SNARE associated Golgi protein family [Source:UniProtKB/TrEMBL;Acc:F4IBM1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.