CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 2
peroxisome 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91806	Soybean	plasma membrane	97.79	97.79
VIT_18s0072g01050.t01	Wine grape	cytosol, golgi, peroxisome	79.34	77.06
Bra016097.1-P	Field mustard	plasma membrane	76.75	76.47
CDX96363	Canola	plasma membrane	76.75	76.47
CDX72847	Canola	plasma membrane	76.38	76.1
CDX82201	Canola	peroxisome	76.75	75.36
Solyc06g065400.2.1	Tomato	plasma membrane	77.49	74.47
Bra003904.1-P	Field mustard	peroxisome	76.01	74.37
PGSC0003DMT400067170	Potato	plasma membrane	77.12	74.11
PGSC0003DMT400002299	Potato	golgi, peroxisome, plasma membrane	77.49	73.68
GSMUA_Achr6P06250_001	Banana	plasma membrane	73.06	72.53
GSMUA_Achr6P04140_001	Banana	plasma membrane	72.32	71.79
GSMUA_Achr7P11860_001	Banana	peroxisome	72.69	71.12
HORVU4Hr1G006740.1	Barley	endoplasmic reticulum, plasma membrane	63.47	71.07
EER93600	Sorghum	peroxisome, plasma membrane, plastid	66.42	64.52
TraesCS4A01G272200.1	Wheat	plasma membrane	66.42	64.29
Os03t0703900-01	Rice	peroxisome	65.68	64.26
Zm00001d033664_P001	Maize	peroxisome	65.68	64.26
TraesCS4B01G041800.1	Wheat	plasma membrane	66.42	64.06
TraesCS4D01G039000.1	Wheat	plasma membrane	66.42	63.83
AT1G71940.2	Thale cress	plasma membrane	70.85	62.75
CDY03670	Canola	peroxisome	47.6	62.62
Bra007997.1-P	Field mustard	plasma membrane	47.23	62.14
Solyc11g018620.1.1	Tomato	endoplasmic reticulum, plasma membrane	77.86	61.7
KRH39560	Soybean	plasma membrane	58.67	61.63
KRH74398	Soybean	golgi, peroxisome, plasma membrane	59.04	55.56
CDY36672	Canola	cytosol, nucleus, plasma membrane	76.38	45.7
CDX68293	Canola	cytosol, nucleus, plasma membrane, plastid	72.32	42.52

Protein Annotations

EMBL:ACUP02006645	EMBL:BT095962	EnsemblPlants:KRH34979	EnsemblPlantsGene:GLYMA_10G216600	EntrezGene:100789661	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:SNARE_assoc	PANTHER:PTHR43220	PANTHER:PTHR43220:SF3	PFAM:PF09335
ProteinID:KRH34979	ProteinID:KRH34979.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001B16B54	UniProt:C6TEE0
MapMan:35.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:44831564..44835080

Molecular Weight (calculated)

30357.5 Da

IEP (calculated)

10.020

GRAVY (calculated)

0.439

Length

271 amino acids

Sequence
(BLAST)

001: MAAPRNVTAT RDEEKGEEDD SPSAKKPKSE RFPLNTWEFA VAVAVFFVFS TGLFCVYLSL PSAAYTNLKL PRTLSDLRLL KEHLSAYASN HPAQFILGYC
101: STYIFMQTFM IPGTIFMSLL AGALFGVVRG ILLVVFNATA GASSCFFLSK LIGRPLVSWL WPEKLRFFQA EIAKRRDRLL NYMLFLRITP TLPNLFINLA
201: SPIVDVPFHI FFSATLIGLV PASYITVRAG LALGDLKSIK DLYDFKTLSV LFLIGFVSIA PTLLKRKRVY E

Best Arabidopsis Sequence Match ( AT4G09580.1 )
(BLAST)

001: MAAPRNLTGD GGARQLVKDE ESPAASSAAK GLLNDDSPTG KRTKSERFPL SRWEFAVFFT VFLVFTTGLF CIYLTMPAAE YGKLKVPRTI SDLRLLKENL
101: GSYASEYQAR FILGYCSTYI FMQTFMIPGT IFMSLLAGAL FGVVRGFVLV VLNATAGACS CFFLSKLVGR PLVNWLWPEK LRFFQAEIAK RRDRLLNYML
201: FLRITPTLPN LFINLSSPIV DIPFHVFFLA TLVGLMPASY ITVRAGLALG DLRSVKDLYD FKTLSVLFLI GSISIFPALL KRKRVYE

Arabidopsis Description

Uncharacterized membrane protein At4g09580 [Source:UniProtKB/Swiss-Prot;Acc:Q8L586]
SUBAcon: [peroxisome,golgi,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.