Factsheet for HORVU2Hr1G054810.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

plastid 2
endoplasmic reticulum 2
extracellular 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
TargetP:	secretory
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G023440.1	Barley	endoplasmic reticulum, plasma membrane	98.15	59.55
TraesCS2D01G446700.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	97.22	41.34
TraesCS2B01G468200.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	97.22	41.34
TraesCS2A01G447800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	96.3	40.94
HORVU7Hr1G051100.2	Barley	endoplasmic reticulum, plasma membrane, vacuole	93.52	39.76
Bra012640.1-P	Field mustard	cytosol	76.85	39.52
CDX90446	Canola	cytosol	76.85	39.52
Os04t0592600-01	Rice	plasma membrane, vacuole	92.59	39.37
Zm00001d000439_P002	Maize	endoplasmic reticulum, plasma membrane, vacuole	89.81	38.19
EES12761	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	89.81	38.19
GSMUA_Achr4P19040_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	87.04	37.9
GSMUA_Achr4P12280_001	Banana	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	81.48	36.07
GSMUA_Achr4P27330_001	Banana	endoplasmic reticulum, plasma membrane, vacuole	84.26	35.83
VIT_02s0012g01630.t01	Wine grape	peroxisome, plasma membrane, vacuole	84.26	35.83
GSMUA_Achr9P23350_001	Banana	mitochondrion, plasma membrane	77.78	34.43
HORVU2Hr1G049420.14	Barley	cytosol, plastid	94.44	33.33
CDY01492	Canola	plasma membrane	50.93	33.33
Bra040182.1-P	Field mustard	plasma membrane	78.7	33.07
CDY54781	Canola	plasma membrane	78.7	33.07
CDX78801	Canola	plasma membrane	78.7	33.07
KRH39560	Soybean	plasma membrane	78.7	32.95
PGSC0003DMT400045191	Potato	plasma membrane	83.33	32.61
Solyc08g076670.2.1	Tomato	plasma membrane	83.33	32.61
HORVU4Hr1G006740.1	Barley	endoplasmic reticulum, plasma membrane	72.22	32.23
AT4G17790.1	Thale cress	plasma membrane	77.78	31.82
KRH74398	Soybean	golgi, peroxisome, plasma membrane	78.7	29.51
CDY01491	Canola	golgi, peroxisome, plasma membrane	31.48	14.41
HORVU7Hr1G044670.7	Barley	plasma membrane	12.96	9.21

Protein Annotations

EnsemblPlants:HORVU2Hr1G054810.1	EnsemblPlantsGene:HORVU2Hr1G054810	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:SNARE_assoc
PANTHER:PTHR43220	PANTHER:PTHR43220:SF6	PFAM:PF09335	TMHMM:TMhelix	UniParc:UPI000B4756B8	UniProt:A0A287I1B3
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:337971746..337972366

Molecular Weight (calculated)

11870.9 Da

IEP (calculated)

10.464

GRAVY (calculated)

0.797

Length

108 amino acids

Sequence
(BLAST)

001: VALVVFATSA GASSCYFLSK LIGKPLVFVL WPDKLTFFQK QVAKRREKLL NYMLFLRVTP TLPNTFINLA SPIIDVPFHT FLLATLIGLI PAAYVTVRAG
101: IALGELTS

Best Arabidopsis Sequence Match ( AT1G71940.1 )
(BLAST)

001: MAPTRILTRD EELGVISDDD DSPSGKRSKL DRFPLSRWEL AVSLGVFLVF SSGLCCIYMT MPAAEFGKLK LPRSLADLRL LKDNLANYAN EYPAQFVLGY
101: CATYIFMQTF MIPGTIFMSL LAGALFGVFK GVVLVVFNAT AGATSCFFLS KLIGRPLITW LWPDKLRFFQ AEISKRRDKL LNYMLFLRIT PTLPNLFINL
201: ASPIVDVPFH VFFLATLIGL IPAAYITVRA GLAIGDLKSV KDLYDFKTLS VLFLIGFISI LPTILKRKKI VE

Arabidopsis Description

SNARE associated Golgi protein family [Source:UniProtKB/TrEMBL;Acc:F4IBM1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.