Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38056 | Canola | nucleus | 92.67 | 92.67 |
| Bra033217.1-P | Field mustard | nucleus | 62.67 | 92.16 |
| CDX90077 | Canola | nucleus | 90.67 | 91.89 |
| CDY15128 | Canola | nucleus | 91.33 | 87.82 |
| KRH48832 | Soybean | nucleus | 86.67 | 86.09 |
| VIT_16s0013g00610.t01 | Wine grape | nucleus | 84.67 | 84.11 |
| KRH11252 | Soybean | nucleus | 84.67 | 84.11 |
| Solyc03g093680.2.1 | Tomato | nucleus | 80.67 | 80.13 |
| GSMUA_Achr11P... | Banana | nucleus | 54.67 | 78.85 |
| GSMUA_Achr11P... | Banana | nucleus | 54.0 | 77.88 |
| Os12t0287200-01 | Rice | nucleus | 82.0 | 76.88 |
| Zm00001d049723_P001 | Maize | extracellular | 82.0 | 76.4 |
| EES13219 | Sorghum | nucleus | 80.67 | 76.1 |
| TraesCS7A01G323400.1 | Wheat | nucleus | 80.67 | 74.23 |
| TraesCS7B01G224300.1 | Wheat | nucleus | 80.67 | 74.23 |
| TraesCS7D01G320000.1 | Wheat | nucleus | 80.67 | 74.23 |
| HORVU7Hr1G077420.4 | Barley | nucleus | 80.67 | 73.78 |
| EER99060 | Sorghum | nucleus | 74.67 | 70.44 |
| Os08t0107900-01 | Rice | nucleus | 72.67 | 66.87 |
| Zm00001d035019_P001 | Maize | nucleus | 73.33 | 62.86 |
| KRH66476 | Soybean | nucleus | 76.67 | 58.97 |
| GSMUA_Achr11P... | Banana | mitochondrion | 46.67 | 56.0 |
| PGSC0003DMT400054151 | Potato | nucleus | 77.33 | 51.33 |
| Bra032668.1-P | Field mustard | cytosol | 82.67 | 46.62 |
Protein Annotations
| MapMan:17.3.1.1.2 | Gene3D:3.30.1560.10 | EntrezGene:837560 | UniProt:A0A178WA48 | ProteinID:AAC24371.1 | ProteinID:AEE27388.1 |
| ArrayExpress:AT1G02140 | EnsemblPlantsGene:AT1G02140 | RefSeq:AT1G02140 | TAIR:AT1G02140 | RefSeq:AT1G02140-TAIR-G | EnsemblPlants:AT1G02140.1 |
| TAIR:AT1G02140.1 | EMBL:AY065157 | EMBL:AY087464 | EMBL:AY114602 | GO:GO:0000003 | GO:GO:0000184 |
| GO:GO:0000932 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006397 | GO:GO:0006412 | GO:GO:0006417 | GO:GO:0006810 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008380 | GO:GO:0009056 | GO:GO:0009058 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009605 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| GO:GO:0009856 | GO:GO:0009987 | GO:GO:0010183 | GO:GO:0010628 | GO:GO:0016607 | GO:GO:0019538 |
| GO:GO:0035145 | GO:GO:0051028 | InterPro:IPR036605 | EMBL:KF051000 | Symbol:MEE63 | InterPro:Mago_nashi |
| InterPro:Mago_nashi_sf | RefSeq:NP_171716.1 | UniProt:O23676 | ProteinID:OAP15287.1 | PFAM:PF02792 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR12638 | SUPFAM:SSF89817 | UniParc:UPI0000000F6F |
Description
MEE63MEE63 [Source:UniProtKB/TrEMBL;Acc:A0A178WA48]
Coordinates
chr1:-:403100..404456
Molecular Weight (calculated)
17458.8 Da
IEP (calculated)
5.328
GRAVY (calculated)
-0.403
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEEATEFY LRYYVGHKGK FGHEFLEFEF REDGKLRYAN NSNYKNDTII RKEVFLTPAV LKECKRIVSE SEILKEDDNN WPEPDRVGKQ ELEIVLGNEH
101: ISFATSKIGS LVDCQSSNDP EGLRIFYYLV QDLKCLVFSL ISLHFKIKPI
101: ISFATSKIGS LVDCQSSNDP EGLRIFYYLV QDLKCLVFSL ISLHFKIKPI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.