Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
20408568
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES13219 | Sorghum | nucleus | 93.17 | 94.34 |
| Os12t0287200-01 | Rice | nucleus | 90.68 | 91.25 |
| VIT_16s0013g00610.t01 | Wine grape | nucleus | 83.23 | 88.74 |
| TraesCS7A01G323400.1 | Wheat | nucleus | 88.82 | 87.73 |
| TraesCS7D01G320000.1 | Wheat | nucleus | 88.82 | 87.73 |
| TraesCS7B01G224300.1 | Wheat | nucleus | 88.82 | 87.73 |
| GSMUA_Achr11P... | Banana | nucleus | 56.52 | 87.5 |
| KRH48832 | Soybean | nucleus | 81.99 | 87.42 |
| HORVU7Hr1G077420.4 | Barley | nucleus | 88.82 | 87.2 |
| KRH11252 | Soybean | nucleus | 81.37 | 86.75 |
| GSMUA_Achr11P... | Banana | nucleus | 55.9 | 86.54 |
| CDX90077 | Canola | nucleus | 79.5 | 86.49 |
| CDY38056 | Canola | nucleus | 79.5 | 85.33 |
| Bra033217.1-P | Field mustard | nucleus | 52.8 | 83.33 |
| AT1G02140.1 | Thale cress | nucleus | 76.4 | 82.0 |
| CDY15128 | Canola | nucleus | 78.88 | 81.41 |
| Solyc03g093680.2.1 | Tomato | nucleus | 74.53 | 79.47 |
| Zm00001d035019_P001 | Maize | nucleus | 84.47 | 77.71 |
| Os08t0107900-01 | Rice | nucleus | 78.26 | 77.3 |
| KRH66476 | Soybean | nucleus | 73.91 | 61.03 |
| GSMUA_Achr11P... | Banana | mitochondrion | 45.96 | 59.2 |
| PGSC0003DMT400054151 | Potato | nucleus | 70.81 | 50.44 |
| Bra032668.1-P | Field mustard | cytosol | 73.91 | 44.74 |
Protein Annotations
| EntrezGene:100280575 | MapMan:17.3.1.1.2 | Gene3D:3.30.1560.10 | ProteinID:AQK51195.1 | UniProt:B4FKM4 | EMBL:BT037662 |
| EMBL:EU952682 | EMBL:EU966672 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| InterPro:IPR036605 | InterPro:Mago_nashi | InterPro:Mago_nashi_sf | PFAM:PF02792 | PANTHER:PTHR12638 | PANTHER:PTHR12638:SF1 |
| SUPFAM:SSF89817 | UniParc:UPI00017B69D7 | EnsemblPlantsGene:Zm00001d049723 | EnsemblPlants:Zm00001d049723_P001 | EnsemblPlants:Zm00001d049723_T001 | SEG:seg |
Description
Protein mago nashi homolog
Coordinates
chr4:-:41535564..41537887
Molecular Weight (calculated)
18507.9 Da
IEP (calculated)
5.696
GRAVY (calculated)
-0.535
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAGGENSG AGEGEGEFYL RYYVGHKGKF GHEFLEFEFR PDGKLRYANN SNYKNDTMIR KEVFVSPSVL REARRIIQES DIMKEDDSNW PEPDRIGRQE
101: LEIVMGNEHI SFTTSKIGSL VDVQSSKDPE GLRIFYYLVQ DLKCFVFSLI NLHFKIKPIQ S
101: LEIVMGNEHI SFTTSKIGSL VDVQSSKDPE GLRIFYYLVQ DLKCFVFSLI NLHFKIKPIQ S
001: MAAEEATEFY LRYYVGHKGK FGHEFLEFEF REDGKLRYAN NSNYKNDTII RKEVFLTPAV LKECKRIVSE SEILKEDDNN WPEPDRVGKQ ELEIVLGNEH
101: ISFATSKIGS LVDCQSSNDP EGLRIFYYLV QDLKCLVFSL ISLHFKIKPI
101: ISFATSKIGS LVDCQSSNDP EGLRIFYYLV QDLKCLVFSL ISLHFKIKPI
Arabidopsis Description
MEE63MEE63 [Source:UniProtKB/TrEMBL;Acc:A0A178WA48]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.