Factsheet for AT1G13690.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX98121	Canola	cytosol	94.35	94.35
Bra040722.1-P	Field mustard	nucleus	93.79	93.79
Solyc04g005350.2.1	Tomato	nucleus	75.71	80.24
KRH70956	Soybean	nucleus	76.27	78.49
KRH75093	Soybean	cytosol	75.71	77.91
GSMUA_Achr4P23500_001	Banana	nucleus	75.14	77.78
VIT_05s0102g00560.t01	Wine grape	cytosol	75.14	76.88
Zm00001d013750_P001	Maize	extracellular, mitochondrion	70.62	75.76
TraesCS6A01G368600.1	Wheat	nucleus	69.49	75.46
TraesCS6B01G404500.1	Wheat	nucleus	69.49	75.46
TraesCS6D01G352100.1	Wheat	nucleus	69.49	75.46
EER91257	Sorghum	cytosol, nucleus, plastid	71.19	75.0
VIT_05s0102g00650.t01	Wine grape	nucleus	69.49	73.21
HORVU6Hr1G087100.1	Barley	nucleus	70.06	64.58
PGSC0003DMT400004879	Potato	nucleus	75.71	64.11
CDY36401	Canola	cytosol	94.92	61.99
Os03t0600400-01	Rice	cytosol, mitochondrion	16.95	55.56
TraesCS2A01G136300.1	Wheat	cytosol, nucleus, plastid	36.16	47.76
TraesCS7A01G179700.1	Wheat	nucleus	17.51	12.16

Protein Annotations

Gene3D:3.30.70.330	MapMan:35.2	EntrezGene:837930	UniProt:A0A178WKP3	ProteinID:AEE29058.1	EMBL:AK228412
ArrayExpress:AT1G13690	EnsemblPlantsGene:AT1G13690	RefSeq:AT1G13690	TAIR:AT1G13690	RefSeq:AT1G13690-TAIR-G	EnsemblPlants:AT1G13690.1
TAIR:AT1G13690.1	Symbol:ATE1	Unigene:At.66943	ncoils:Coil	InterPro:Cyclophilin-type_PPIase	GO:GO:0000413
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0019538	InterPro:IPR000504
InterPro:IPR012677	RefSeq:NP_563931.2	InterPro:Nucleotide-bd_a/b_plait_sf	ProteinID:OAP18897.1	PFAM:PF00076	PO:PO:0000013
PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
InterPro:PPIE_RRM	PFscan:PS50102	PANTHER:PTHR11071	PANTHER:PTHR11071:SF319	UniProt:Q0WRA3	InterPro:RBD_domain_sf
InterPro:RRM_dom	SMART:SM00360	SUPFAM:SSF54928	UniParc:UPI0000196CB4	SEG:seg	:

Description

ATE1ATE1 [Source:UniProtKB/TrEMBL;Acc:A0A178WKP3]

Coordinates

chr1:+:4693282..4694410

Molecular Weight (calculated)

19810.1 Da

IEP (calculated)

4.403

GRAVY (calculated)

-0.740

Length

177 amino acids

Sequence
(BLAST)

001: MAAVQQQQAM QKNTLYVGGL ADEVNESILH AAFIPFGDIK DVKTPLDQAN QKHRSFGFVT FLEREDASAA MDNMDGAELY GRVLTVNYAL PEKIKGGEQG
101: WAAHPLWADA DTWFERQQQE KEILKMQAEN KAAMETAEEL HRKKLAEDRQ GEMEEDTDTK NDPMARAEAD ALSHGDA

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.