Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29218 | Canola | mitochondrion | 95.8 | 95.8 |
| Bra024480.1-P | Field mustard | mitochondrion | 94.96 | 94.96 |
| CDY20906 | Canola | mitochondrion | 94.12 | 94.12 |
| Bra039913.1-P | Field mustard | cytosol, mitochondrion, nucleus | 93.28 | 93.28 |
| CDY25130 | Canola | cytosol, mitochondrion, nucleus | 93.28 | 93.28 |
| CDY38175 | Canola | cytosol, mitochondrion, nucleus | 93.28 | 93.28 |
| GSMUA_Achr8P19300_001 | Banana | cytosol | 76.47 | 77.12 |
| GSMUA_Achr11P... | Banana | nucleus | 75.63 | 76.27 |
| VIT_04s0023g03190.t01 | Wine grape | cytosol | 74.79 | 75.42 |
| Solyc01g110530.2.1 | Tomato | plastid | 74.79 | 75.42 |
| PGSC0003DMT400004094 | Potato | nucleus | 74.79 | 75.42 |
| KRH08096 | Soybean | cytosol | 78.99 | 74.6 |
| KRH69799 | Soybean | cytosol | 78.15 | 73.81 |
| Os04t0663800-01 | Rice | cytosol, nucleus | 43.7 | 72.22 |
| Zm00001d025062_P001 | Maize | extracellular, mitochondrion, plastid | 69.75 | 66.94 |
| EES11766 | Sorghum | nucleus | 68.91 | 66.13 |
| HORVU2Hr1G001350.2 | Barley | nucleus | 67.23 | 65.57 |
| HORVU2Hr1G109660.3 | Barley | cytosol | 25.21 | 65.22 |
| TraesCS2D01G009700.1 | Wheat | cytosol | 65.55 | 64.46 |
| TraesCS2A01G007900.1 | Wheat | cytosol, mitochondrion, nucleus | 65.55 | 64.46 |
| Os04t0118500-01 | Rice | plastid | 66.39 | 64.23 |
| TraesCS2B01G012800.1 | Wheat | cytosol, mitochondrion, nucleus | 65.55 | 63.41 |
| TraesCS2D01G491300.1 | Wheat | mitochondrion | 57.98 | 61.06 |
| HORVU5Hr1G121760.1 | Barley | cytosol | 21.85 | 46.43 |
| HORVU6Hr1G068220.3 | Barley | cytosol | 30.25 | 40.91 |
| HORVU4Hr1G072290.1 | Barley | cytosol | 32.77 | 40.21 |
| OQU82515 | Sorghum | nucleus | 66.39 | 38.16 |
| TraesCS3B01G116600.1 | Wheat | cytosol, mitochondrion, nucleus | 26.05 | 31.31 |
| CDX87855 | Canola | nucleus | 94.96 | 30.21 |
| TraesCS4A01G388100.2 | Wheat | cytosol, mitochondrion, nucleus | 26.89 | 29.91 |
| HORVU3Hr1G096490.2 | Barley | cytosol | 32.77 | 27.86 |
| TraesCS5B01G513900.1 | Wheat | nucleus | 26.89 | 22.07 |
| TraesCS6B01G233500.1 | Wheat | mitochondrion, plastid | 24.37 | 15.93 |
| OQU79160 | Sorghum | cytosol, nucleus, plastid | 32.77 | 15.73 |
Protein Annotations
| MapMan:18.12.4 | PDB:1J6Y | Gene3D:3.10.50.40 | EntrezGene:816316 | ProteinID:AAD20122.1 | ProteinID:AEC06719.1 |
| EMBL:AF360318 | ArrayExpress:AT2G18040 | EnsemblPlantsGene:AT2G18040 | RefSeq:AT2G18040 | TAIR:AT2G18040 | RefSeq:AT2G18040-TAIR-G |
| EnsemblPlants:AT2G18040.1 | TAIR:AT2G18040.1 | EMBL:AY056314 | EMBL:AY057514 | EMBL:AY085059 | EMBL:F13919 |
| GO:GO:0000003 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005829 | GO:GO:0005886 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009506 | GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 | GO:GO:0009630 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009909 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016853 |
| GO:GO:0019538 | GO:GO:0032880 | GO:GO:0051726 | InterPro:IPR000297 | RefSeq:NP_179395.1 | PFAM:PF00639 |
| Symbol:PIN1AT | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | InterPro:PPIase_PpiC | InterPro:PPIase_PpiC_CS | ScanProsite:PS01096 | PFscan:PS50198 |
| PANTHER:PTHR10657 | PANTHER:PTHR10657:SF4 | UniProt:Q9SL42 | SUPFAM:SSF54534 | UniParc:UPI000009FDDF | : |
Description
PIN1Peptidyl-prolyl cis-trans isomerase Pin1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL42]
Coordinates
chr2:+:7841940..7843942
Molecular Weight (calculated)
13015.4 Da
IEP (calculated)
9.710
GRAVY (calculated)
-0.549
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MASRDQVKAS HILIKHQGSR RKASWKDPEG KIILTTTREA AVEQLKSIRE DIVSGKANFE EVATRVSDCS SAKRGGDLGS FGRGQMQKPF EEATYALKVG
101: DISDIVDTDS GVHIIKRTA
101: DISDIVDTDS GVHIIKRTA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.