Factsheet for GSMUA_Achr11P00770_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr1P03630_001
GSMUA_Achr2P11820_001
GSMUA_Achr3P06800_001
GSMUA_Achr5P10250_001
GSMUA_Achr9P15180_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18040.1	GSMUA_Achr1P03630_001	AT2G45660.1	20129060
AT2G18040.1	GSMUA_Achr2P11820_001	AT2G45660.1	20129060
AT2G18040.1	GSMUA_Achr5P10250_001	AT2G45660.1	20129060
AT2G18040.1	GSMUA_Achr10P...	AT4G24540.1	20129060
AT2G18040.1	GSMUA_Achr3P06800_001	AT4G24540.1	20129060
AT2G18040.1	GSMUA_Achr9P15180_001	AT4G24540.1	20129060

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19300_001	Banana	cytosol	90.68	90.68
PGSC0003DMT400004094	Potato	nucleus	77.97	77.97
Bra039913.1-P	Field mustard	cytosol, mitochondrion, nucleus	77.12	76.47
CDY38175	Canola	cytosol, mitochondrion, nucleus	77.12	76.47
Solyc01g110530.2.1	Tomato	plastid	76.27	76.27
AT2G18040.1	Thale cress	mitochondrion	76.27	75.63
CDY25130	Canola	cytosol, mitochondrion, nucleus	76.27	75.63
Bra024480.1-P	Field mustard	mitochondrion	75.42	74.79
CDY20906	Canola	mitochondrion	75.42	74.79
CDY29218	Canola	mitochondrion	75.42	74.79
VIT_04s0023g03190.t01	Wine grape	cytosol	74.58	74.58
Zm00001d025062_P001	Maize	extracellular, mitochondrion, plastid	77.12	73.39
EES11766	Sorghum	nucleus	75.42	71.77
Os04t0118500-01	Rice	plastid	74.58	71.54
KRH08096	Soybean	cytosol	76.27	71.43
KRH69799	Soybean	cytosol	75.42	70.63
HORVU2Hr1G001350.2	Barley	nucleus	72.88	70.49
TraesCS2D01G009700.1	Wheat	cytosol	72.03	70.25
TraesCS2A01G007900.1	Wheat	cytosol, mitochondrion, nucleus	72.03	70.25
TraesCS2B01G012800.1	Wheat	cytosol, mitochondrion, nucleus	72.88	69.92
TraesCS2D01G491300.1	Wheat	mitochondrion	65.25	68.14
PGSC0003DMT400051327	Potato	nucleus	72.88	67.72
Solyc02g062250.2.1	Tomato	nucleus	72.88	67.72
Os04t0663800-01	Rice	cytosol, nucleus	40.68	66.67
HORVU2Hr1G109660.3	Barley	cytosol	24.58	63.04
HORVU5Hr1G121760.1	Barley	cytosol	26.27	55.36
HORVU4Hr1G072290.1	Barley	cytosol	40.68	49.48
HORVU6Hr1G068220.3	Barley	cytosol	36.44	48.86
TraesCS3B01G116600.1	Wheat	cytosol, mitochondrion, nucleus	33.05	39.39
OQU82515	Sorghum	nucleus	68.64	39.13
TraesCS4A01G388100.2	Wheat	cytosol, mitochondrion, nucleus	33.9	37.38
HORVU3Hr1G096490.2	Barley	cytosol	40.68	34.29
TraesCS5B01G513900.1	Wheat	nucleus	32.2	26.21
CDX87855	Canola	nucleus	76.27	24.06
TraesCS6B01G233500.1	Wheat	mitochondrion, plastid	31.36	20.33
OQU79160	Sorghum	cytosol, nucleus, plastid	37.29	17.74

Protein Annotations

MapMan:18.12.4	Gene3D:3.10.50.40	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr11G00770_001	EnsemblPlants:GSMUA_Achr11P00770_001	EnsemblPlants:GSMUA_Achr11T00770_001	InterPro:IPR000297	UniProt:M0RNA8	PFAM:PF00639
InterPro:PPIase_PpiC	PFscan:PS50198	PANTHER:PTHR10657	PANTHER:PTHR10657:SF4	SUPFAM:SSF54534	UniParc:UPI000296DBAC

Description

Peptidyl-prolyl cis-trans isomerase Pin1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G00770_001]

Coordinates

chr11:-:468576..473670

Molecular Weight (calculated)

12807.1 Da

IEP (calculated)

9.264

GRAVY (calculated)

-0.433

Length

118 amino acids

Sequence
(BLAST)

001: MAAEQVRASH ILIKHEGSRR KASWKDPDGR VISATTRDAA VRQLLTLRDD IDSGKARFQD VAVLHSDCSS AKRGGDLGSF GRGQMQKPFE EATYALKVGD
101: LSGIVDTDSG VHIILRTS

Best Arabidopsis Sequence Match ( AT2G18040.1 )
(BLAST)

001: MASRDQVKAS HILIKHQGSR RKASWKDPEG KIILTTTREA AVEQLKSIRE DIVSGKANFE EVATRVSDCS SAKRGGDLGS FGRGQMQKPF EEATYALKVG
101: DISDIVDTDS GVHIIKRTA

Arabidopsis Description

PIN1Peptidyl-prolyl cis-trans isomerase Pin1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL42]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.