Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX81988 | Canola | plastid | 81.33 | 82.71 |
| CDY13852 | Canola | plastid | 81.33 | 82.43 |
| Bra031147.1-P | Field mustard | plastid | 81.33 | 82.43 |
| KRH26888 | Soybean | nucleus, plastid | 67.0 | 67.68 |
| PGSC0003DMT400047218 | Potato | cytosol, extracellular, plastid | 65.67 | 67.24 |
| KRH22464 | Soybean | nucleus, plastid | 66.33 | 67.0 |
| VIT_12s0057g00020.t01 | Wine grape | plastid | 66.33 | 66.56 |
| KRH25480 | Soybean | nucleus, plastid | 64.0 | 65.98 |
| Os07t0558500-01 | Rice | plastid | 63.0 | 65.85 |
| HORVU2Hr1G041260.1 | Barley | mitochondrion, plastid | 62.67 | 65.73 |
| TraesCS2B01G233300.1 | Wheat | plastid | 62.0 | 65.03 |
| TraesCS2A01G206100.1 | Wheat | mitochondrion, plastid | 62.0 | 65.03 |
| TraesCS2D01G210000.1 | Wheat | plastid | 61.67 | 64.69 |
| KRH56048 | Soybean | nucleus, plastid | 62.67 | 64.6 |
| GSMUA_Achr9P12190_001 | Banana | plastid | 61.33 | 64.56 |
| EER99538 | Sorghum | plastid | 60.67 | 64.08 |
| Zm00001d006588_P001 | Maize | plastid | 60.33 | 63.73 |
| GSMUA_Achr8P03730_001 | Banana | plastid | 57.67 | 60.28 |
| Solyc07g054820.2.1 | Tomato | plastid | 47.67 | 57.2 |
| Zm00001d021764_P002 | Maize | plastid | 51.0 | 50.66 |
| KRH13607 | Soybean | cytosol | 9.33 | 37.33 |
Protein Annotations
| MapMan:1.1.1.3.10 | EntrezGene:816623 | UniProt:A0A178VVV5 | ProteinID:AAD20906.1 | ProteinID:AEC07092.1 | ArrayExpress:AT2G20890 |
| EnsemblPlantsGene:AT2G20890 | RefSeq:AT2G20890 | TAIR:AT2G20890 | RefSeq:AT2G20890-TAIR-G | EnsemblPlants:AT2G20890.1 | TAIR:AT2G20890.1 |
| EMBL:AY062799 | EMBL:AY081596 | EMBL:AY087394 | EMBL:AY899908 | Unigene:At.48498 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009527 |
| GO:GO:0009528 | GO:GO:0009532 | GO:GO:0009534 | GO:GO:0009535 | GO:GO:0009536 | GO:GO:0009570 |
| GO:GO:0009579 | GO:GO:0009628 | GO:GO:0009707 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0010027 |
| GO:GO:0010182 | GO:GO:0010207 | GO:GO:0010319 | GO:GO:0015979 | GO:GO:0015996 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0045037 | GO:GO:0045038 | GO:GO:1902458 | GO:GO:1903426 |
| GO:GO:2000070 | HAMAP:MF_01843 | RefSeq:NP_565491.1 | ProteinID:OAP09944.1 | PFAM:PF11264 | PO:PO:0000003 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | Symbol:PSB29 | PANTHER:PTHR34793 | PANTHER:PTHR34793:SF1 | UniProt:Q9SKT0 | TIGRFAMs:TIGR03060 |
| InterPro:Thf1 | UniParc:UPI00000A76CF | : | : | : | : |
Description
THF1THF1 [Source:UniProtKB/TrEMBL;Acc:A0A178VVV5]
Coordinates
chr2:+:8987584..8989416
Molecular Weight (calculated)
33797.4 Da
IEP (calculated)
9.562
GRAVY (calculated)
-0.388
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAISSLS FPALGQSDKI SNFASSRPLA SAIRICTKFS RLSLNSRSTS KSLIHCMSNV TADVPPVSET KSKFLKAYKR PIPSIYNTVL QELIVQQHLM
101: RYKKTYRYDP VFALGFVTVY DQLMEGYPSD QDRDAIFKAY IEALNEDPKQ YRIDAQKMEE WARSQTSASL VDFSSKEGDI EAVLKDIAGR AGSKEGFSYS
201: RFFAVGLFRL LELASATDPT VLDKLCASLN INKKSVDRDL DVYRNLLSKL VQAKELLKEY VEREKKKQGE RAQSQKANET ISKCLGDTLY NPSFLVERKS
101: RYKKTYRYDP VFALGFVTVY DQLMEGYPSD QDRDAIFKAY IEALNEDPKQ YRIDAQKMEE WARSQTSASL VDFSSKEGDI EAVLKDIAGR AGSKEGFSYS
201: RFFAVGLFRL LELASATDPT VLDKLCASLN INKKSVDRDL DVYRNLLSKL VQAKELLKEY VEREKKKQGE RAQSQKANET ISKCLGDTLY NPSFLVERKS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.