Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000988.1-P | Field mustard | mitochondrion | 78.28 | 77.99 |
| CDX91926 | Canola | mitochondrion | 78.28 | 77.99 |
| CDX74319 | Canola | mitochondrion | 77.53 | 76.95 |
| VIT_14s0171g00220.t01 | Wine grape | mitochondrion | 66.67 | 68.99 |
| KRH20683 | Soybean | mitochondrion, nucleus | 60.67 | 62.07 |
| Os04t0490400-01 | Rice | mitochondrion | 60.3 | 61.92 |
| TraesCS2A01G348100.1 | Wheat | mitochondrion | 58.8 | 60.38 |
| TraesCS2B01G366500.1 | Wheat | mitochondrion | 58.8 | 60.38 |
| TraesCS2D01G346400.1 | Wheat | mitochondrion | 58.8 | 60.38 |
| HORVU2Hr1G084680.4 | Barley | plastid | 43.82 | 59.39 |
| EES12421 | Sorghum | mitochondrion | 57.3 | 59.3 |
| GSMUA_Achr10P... | Banana | mitochondrion | 59.18 | 58.74 |
| Zm00001d025745_P001 | Maize | mitochondrion | 55.43 | 57.14 |
| Solyc11g007740.1.1 | Tomato | mitochondrion | 59.18 | 57.04 |
| PGSC0003DMT400070269 | Potato | mitochondrion | 59.18 | 56.43 |
| KRH13338 | Soybean | cytosol | 40.82 | 56.19 |
| AT3G63190.1 | Thale cress | plastid | 28.09 | 27.27 |
Protein Annotations
| Gene3D:1.10.132.20 | MapMan:17.7.5.3 | Gene3D:3.30.1360.40 | EntrezGene:821076 | ProteinID:AEE73716.1 | EMBL:AK176317 |
| EMBL:AK220929 | ArrayExpress:AT3G01800 | EnsemblPlantsGene:AT3G01800 | RefSeq:AT3G01800 | TAIR:AT3G01800 | RefSeq:AT3G01800-TAIR-G |
| EnsemblPlants:AT3G01800.1 | TAIR:AT3G01800.1 | Unigene:At.43211 | EMBL:BT010432 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0043023 | RefSeq:NP_186829.3 | PFAM:PF01765 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PANTHER:PTHR20982 | PANTHER:PTHR20982:SF3 | UniProt:Q6NQM0 | InterPro:RRF_sf | InterPro:Ribosome_recyc_fac | InterPro:Ribosome_recyc_fac_dom |
| SUPFAM:SSF55194 | UniParc:UPI00001BD854 | SEG:seg | : | : | : |
Description
At3g01800 [Source:UniProtKB/TrEMBL;Acc:Q6NQM0]
Coordinates
chr3:+:285871..287950
Molecular Weight (calculated)
29173.7 Da
IEP (calculated)
10.366
GRAVY (calculated)
-0.299
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAMFVRRAL SSRNAIGFLR RSSVVVQSRD FSFISSPNLM MMGGRDLQFD LSMPDFLRDS RRGFAKGKKS KDDSGTGMVD AAPDIGPTVK AAASSQMEAA
101: IDALSRDLTK LRTGRAAPGM LDHIVVETGG VKMPLNHLAL VSVLDPKTLS VNPYDPDTVK ELEKAIVASP LGLNPKLDGQ RLVASIPALT KEHIQAMCKI
201: VTKSSEVVKQ SIRRARQKAL DTIKKAGSSL PKDEVKRLEK EVDELTKKFV KSAEDMCKSK EKEITEA
101: IDALSRDLTK LRTGRAAPGM LDHIVVETGG VKMPLNHLAL VSVLDPKTLS VNPYDPDTVK ELEKAIVASP LGLNPKLDGQ RLVASIPALT KEHIQAMCKI
201: VTKSSEVVKQ SIRRARQKAL DTIKKAGSSL PKDEVKRLEK EVDELTKKFV KSAEDMCKSK EKEITEA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.