Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12421 | Sorghum | mitochondrion | 60.59 | 63.18 |
| Os04t0490400-01 | Rice | mitochondrion | 60.97 | 63.08 |
| VIT_14s0171g00220.t01 | Wine grape | mitochondrion | 58.74 | 61.24 |
| HORVU2Hr1G084680.4 | Barley | plastid | 44.24 | 60.41 |
| TraesCS2D01G346400.1 | Wheat | mitochondrion | 58.36 | 60.38 |
| TraesCS2A01G348100.1 | Wheat | mitochondrion | 58.36 | 60.38 |
| TraesCS2B01G366500.1 | Wheat | mitochondrion | 57.99 | 60.0 |
| Zm00001d025745_P001 | Maize | mitochondrion | 57.25 | 59.46 |
| AT3G01800.1 | Thale cress | mitochondrion | 58.74 | 59.18 |
| CDX91926 | Canola | mitochondrion | 58.74 | 58.96 |
| CDX74319 | Canola | mitochondrion | 58.74 | 58.74 |
| Bra000988.1-P | Field mustard | mitochondrion | 58.36 | 58.58 |
| KRH20683 | Soybean | mitochondrion, nucleus | 54.65 | 56.32 |
| PGSC0003DMT400070269 | Potato | mitochondrion | 55.76 | 53.57 |
| Solyc11g007740.1.1 | Tomato | mitochondrion | 55.02 | 53.43 |
| KRH13338 | Soybean | cytosol | 37.92 | 52.58 |
| GSMUA_Achr7P07510_001 | Banana | plastid | 27.14 | 25.98 |
Protein Annotations
| Gene3D:1.10.132.20 | MapMan:17.7.5.3 | Gene3D:3.30.1360.40 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr10G16550_001 | EnsemblPlants:GSMUA_Achr10P16550_001 | EnsemblPlants:GSMUA_Achr10T16550_001 |
| UniProt:M0RIT0 | PFAM:PF01765 | PANTHER:PTHR20982 | PANTHER:PTHR20982:SF3 | InterPro:RRF_sf | InterPro:Ribosome_recyc_fac |
| InterPro:Ribosome_recyc_fac_dom | SUPFAM:SSF55194 | SignalP:SignalP-noTM | UniParc:UPI0002965293 | SEG:seg | : |
Description
Putative Ribosome-recycling factor [Source:GMGC_GENE;Acc:GSMUA_Achr10G16550_001]
Coordinates
chr10:-:24034506..24038387
Molecular Weight (calculated)
29151.4 Da
IEP (calculated)
10.279
GRAVY (calculated)
-0.302
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMCLRRALQ SRSLLLLRAP RCVVALSPSS CVSPRDPALE EASVLGIRGG FFRVGSDYSL GSRRGFAKGK KSKDDNNDEK IQVDPNFGPT VKSTSLSQME
101: AAIVALSREL SKLRTGRASA GMLDHILVET GGAKMPLNHV AVVSVIDSKT LSVTPYDPTA LKAVESAIIS SPLGLNPTPD GQRLIAAIPP LTKENMQALC
201: KVVTKSSEDV KQSIRRARQK AQDSIKKVAA GFPKDDIKRL EKEIEEMTKR FVKTADDMCK AKEKEITNS
101: AAIVALSREL SKLRTGRASA GMLDHILVET GGAKMPLNHV AVVSVIDSKT LSVTPYDPTA LKAVESAIIS SPLGLNPTPD GQRLIAAIPP LTKENMQALC
201: KVVTKSSEDV KQSIRRARQK AQDSIKKVAA GFPKDDIKRL EKEIEEMTKR FVKTADDMCK AKEKEITNS
001: MMAMFVRRAL SSRNAIGFLR RSSVVVQSRD FSFISSPNLM MMGGRDLQFD LSMPDFLRDS RRGFAKGKKS KDDSGTGMVD AAPDIGPTVK AAASSQMEAA
101: IDALSRDLTK LRTGRAAPGM LDHIVVETGG VKMPLNHLAL VSVLDPKTLS VNPYDPDTVK ELEKAIVASP LGLNPKLDGQ RLVASIPALT KEHIQAMCKI
201: VTKSSEVVKQ SIRRARQKAL DTIKKAGSSL PKDEVKRLEK EVDELTKKFV KSAEDMCKSK EKEITEA
101: IDALSRDLTK LRTGRAAPGM LDHIVVETGG VKMPLNHLAL VSVLDPKTLS VNPYDPDTVK ELEKAIVASP LGLNPKLDGQ RLVASIPALT KEHIQAMCKI
201: VTKSSEVVKQ SIRRARQKAL DTIKKAGSSL PKDEVKRLEK EVDELTKKFV KSAEDMCKSK EKEITEA
Arabidopsis Description
At3g01800 [Source:UniProtKB/TrEMBL;Acc:Q6NQM0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.