Factsheet for HORVU2Hr1G084680.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G346400.1	Wheat	mitochondrion	90.86	68.85
TraesCS2B01G366500.1	Wheat	mitochondrion	90.36	68.46
TraesCS2A01G348100.1	Wheat	mitochondrion	90.36	68.46
Os04t0490400-01	Rice	mitochondrion	76.14	57.69
EES12421	Sorghum	mitochondrion	74.11	56.59
Zm00001d025745_P001	Maize	mitochondrion	73.6	55.98
VIT_14s0171g00220.t01	Wine grape	mitochondrion	62.44	47.67
GSMUA_Achr10P...	Banana	mitochondrion	60.41	44.24
AT3G01800.1	Thale cress	mitochondrion	59.39	43.82
CDX91926	Canola	mitochondrion	59.39	43.66
Bra000988.1-P	Field mustard	mitochondrion	58.88	43.28
CDX74319	Canola	mitochondrion	58.38	42.75
KRH20683	Soybean	mitochondrion, nucleus	56.35	42.53
Solyc11g007740.1.1	Tomato	mitochondrion	52.79	37.55
PGSC0003DMT400070269	Potato	mitochondrion	52.79	37.14
KRH13338	Soybean	cytosol	34.52	35.05
HORVU2Hr1G038570.2	Barley	plastid	31.47	21.23

Protein Annotations

MapMan:17.7.5.3	Gene3D:3.30.1360.40	UniProt:A0A287IQI4	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU2Hr1G084680	EnsemblPlants:HORVU2Hr1G084680.4	PFAM:PF01765	PANTHER:PTHR20982
InterPro:RRF_sf	InterPro:Ribosome_recyc_fac	InterPro:Ribosome_recyc_fac_dom	SUPFAM:SSF55194	UniParc:UPI000B4832EB	SEG:seg

Description

No Description!

Coordinates

chrchr2H:+:612725627..612728540

Molecular Weight (calculated)

20797.2 Da

IEP (calculated)

10.848

GRAVY (calculated)

-0.163

Length

197 amino acids

Sequence
(BLAST)

001: TLRAAAASSA STSVHRLPTA GSLAAARNLP TTQFFLLEIR RGFAKGKKSK NDSRGDTVEA APDIGPTVKS AATAQMDTAV VALSRELSKL RTGRASPGML
101: DHIMVETGDV KVGLGRIAVV SVLDSHTLSV MPYDPNTMKS IENAIASSPL GINPTPDGSR IIAAVPPLTK ETMQAMCKVV TKSAEDFKQS IRRARQK

Best Arabidopsis Sequence Match ( AT3G01800.1 )
(BLAST)

001: MMAMFVRRAL SSRNAIGFLR RSSVVVQSRD FSFISSPNLM MMGGRDLQFD LSMPDFLRDS RRGFAKGKKS KDDSGTGMVD AAPDIGPTVK AAASSQMEAA
101: IDALSRDLTK LRTGRAAPGM LDHIVVETGG VKMPLNHLAL VSVLDPKTLS VNPYDPDTVK ELEKAIVASP LGLNPKLDGQ RLVASIPALT KEHIQAMCKI
201: VTKSSEVVKQ SIRRARQKAL DTIKKAGSSL PKDEVKRLEK EVDELTKKFV KSAEDMCKSK EKEITEA

Arabidopsis Description

At3g01800 [Source:UniProtKB/TrEMBL;Acc:Q6NQM0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.