Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 6
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g007740.1.1 | Tomato | mitochondrion | 95.71 | 96.75 |
| VIT_14s0171g00220.t01 | Wine grape | mitochondrion | 57.5 | 62.4 |
| KRH20683 | Soybean | mitochondrion, nucleus | 57.5 | 61.69 |
| AT3G01800.1 | Thale cress | mitochondrion | 56.43 | 59.18 |
| Bra000988.1-P | Field mustard | mitochondrion | 56.07 | 58.58 |
| CDX91926 | Canola | mitochondrion | 56.07 | 58.58 |
| CDX74319 | Canola | mitochondrion | 55.71 | 57.99 |
| EES12421 | Sorghum | mitochondrion | 52.14 | 56.59 |
| Os04t0490400-01 | Rice | mitochondrion | 52.5 | 56.54 |
| GSMUA_Achr10P... | Banana | mitochondrion | 53.57 | 55.76 |
| TraesCS2A01G348100.1 | Wheat | mitochondrion | 51.43 | 55.38 |
| TraesCS2B01G366500.1 | Wheat | mitochondrion | 51.43 | 55.38 |
| TraesCS2D01G346400.1 | Wheat | mitochondrion | 51.43 | 55.38 |
| Zm00001d025745_P001 | Maize | mitochondrion | 50.36 | 54.44 |
| KRH13338 | Soybean | cytosol | 36.79 | 53.09 |
| HORVU2Hr1G084680.4 | Barley | plastid | 37.14 | 52.79 |
| PGSC0003DMT400049841 | Potato | cytosol, extracellular | 25.0 | 26.22 |
Protein Annotations
| Gene3D:1.10.132.20 | EntrezGene:102584339 | MapMan:17.7.5.3 | Gene3D:3.30.1360.40 | ncoils:Coil | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | UniProt:M1CLW9 | PFAM:PF01765 |
| EnsemblPlantsGene:PGSC0003DMG400027323 | PGSC:PGSC0003DMG400027323 | EnsemblPlants:PGSC0003DMT400070269 | PANTHER:PTHR20982 | InterPro:RRF_sf | InterPro:Ribosome_recyc_fac |
| InterPro:Ribosome_recyc_fac_dom | SUPFAM:SSF55194 | UniParc:UPI00029620D6 | RefSeq:XP_006360499.1 | SEG:seg | : |
Description
Ribosome recycling factor [Source:PGSC_GENE;Acc:PGSC0003DMG400027323]
Coordinates
chr11:-:4472467..4478658
Molecular Weight (calculated)
30750.9 Da
IEP (calculated)
10.005
GRAVY (calculated)
-0.444
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISTRRALA AYRNIYGALR ATNFTANRFS SLIGSTFSPI RYETVPCSLE QTTNFLLESR RSFAKGRKQI RDEVDGDDYG SVTTAVNVGP NIKATAVSQM
101: EAAIDALSRE LTKLRTGRAS AGMLDHIIVD SGGVKTPLCR MAVISVLDPK TLSVNPYDPD SLKELEKAII SSPLGLNPQS DNQRLIVPIP PLTKEHVQAV
201: CKVVAKSSED VKQSIRRARQ KALDTIKKSV PKKKDKDKSA SAFSDDDAKR LEKEIDDLTK KFIKSAEDMC KSKDKEITSS
101: EAAIDALSRE LTKLRTGRAS AGMLDHIIVD SGGVKTPLCR MAVISVLDPK TLSVNPYDPD SLKELEKAII SSPLGLNPQS DNQRLIVPIP PLTKEHVQAV
201: CKVVAKSSED VKQSIRRARQ KALDTIKKSV PKKKDKDKSA SAFSDDDAKR LEKEIDDLTK KFIKSAEDMC KSKDKEITSS
001: MMAMFVRRAL SSRNAIGFLR RSSVVVQSRD FSFISSPNLM MMGGRDLQFD LSMPDFLRDS RRGFAKGKKS KDDSGTGMVD AAPDIGPTVK AAASSQMEAA
101: IDALSRDLTK LRTGRAAPGM LDHIVVETGG VKMPLNHLAL VSVLDPKTLS VNPYDPDTVK ELEKAIVASP LGLNPKLDGQ RLVASIPALT KEHIQAMCKI
201: VTKSSEVVKQ SIRRARQKAL DTIKKAGSSL PKDEVKRLEK EVDELTKKFV KSAEDMCKSK EKEITEA
101: IDALSRDLTK LRTGRAAPGM LDHIVVETGG VKMPLNHLAL VSVLDPKTLS VNPYDPDTVK ELEKAIVASP LGLNPKLDGQ RLVASIPALT KEHIQAMCKI
201: VTKSSEVVKQ SIRRARQKAL DTIKKAGSSL PKDEVKRLEK EVDELTKKFV KSAEDMCKSK EKEITEA
Arabidopsis Description
At3g01800 [Source:UniProtKB/TrEMBL;Acc:Q6NQM0]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.