Factsheet for Solyc11g007740.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070269	Potato	mitochondrion	96.75	95.71
VIT_14s0171g00220.t01	Wine grape	mitochondrion	57.4	61.63
KRH20683	Soybean	mitochondrion, nucleus	57.04	60.54
AT3G01800.1	Thale cress	mitochondrion	57.04	59.18
Bra000988.1-P	Field mustard	mitochondrion	56.68	58.58
CDX91926	Canola	mitochondrion	56.68	58.58
CDX74319	Canola	mitochondrion	56.68	58.36
EES12421	Sorghum	mitochondrion	51.99	55.81
Os04t0490400-01	Rice	mitochondrion	52.35	55.77
GSMUA_Achr10P...	Banana	mitochondrion	53.43	55.02
TraesCS2A01G348100.1	Wheat	mitochondrion	50.9	54.23
TraesCS2B01G366500.1	Wheat	mitochondrion	50.9	54.23
TraesCS2D01G346400.1	Wheat	mitochondrion	50.9	54.23
Zm00001d025745_P001	Maize	mitochondrion	50.18	53.67
KRH13338	Soybean	cytosol	37.18	53.09
HORVU2Hr1G084680.4	Barley	plastid	37.55	52.79
Solyc09g065270.2.1	Tomato	plastid	25.27	26.22

Protein Annotations

Gene3D:1.10.132.20	MapMan:17.7.5.3	Gene3D:3.30.1360.40	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0043023
UniProt:K4D535	PFAM:PF01765	PANTHER:PTHR20982	InterPro:RRF_sf	InterPro:Ribosome_recyc_fac	InterPro:Ribosome_recyc_fac_dom
SUPFAM:SSF55194	EnsemblPlantsGene:Solyc11g007740.1	EnsemblPlants:Solyc11g007740.1.1	UniParc:UPI000276A5A8	SEG:seg	:

Description

No Description!

Coordinates

chr11:+:1970357..1974751

Molecular Weight (calculated)

30451.6 Da

IEP (calculated)

10.018

GRAVY (calculated)

-0.452

Length

277 amino acids

Sequence
(BLAST)

001: MAISTRRALA AYRNIYGALR ATNFTANRLI GSTLSPIRYE TVPCSLEQTT NFLLESRRSF AKGRKQIREE VDGDDYGSVT TAVNVGPNIK ATAVSQMEAA
101: IDALSRELTK LRTGRASAGM LDHIIVDSGG VKTPLCRMAV ISVLDPKTLS VNPYDPDSLK ELEKAIISSP LGLNPQSDNQ RLIVPIPPLT KEHVQAVCKV
201: VAKSSEDVKQ SIRRARQKAL DTIKKSVPKK KDKDKSASAF SEDDAKRLEK EIDDLTKKFI KSAEDMCKSK DREITSS

Best Arabidopsis Sequence Match ( AT3G01800.1 )
(BLAST)

001: MMAMFVRRAL SSRNAIGFLR RSSVVVQSRD FSFISSPNLM MMGGRDLQFD LSMPDFLRDS RRGFAKGKKS KDDSGTGMVD AAPDIGPTVK AAASSQMEAA
101: IDALSRDLTK LRTGRAAPGM LDHIVVETGG VKMPLNHLAL VSVLDPKTLS VNPYDPDTVK ELEKAIVASP LGLNPKLDGQ RLVASIPALT KEHIQAMCKI
201: VTKSSEVVKQ SIRRARQKAL DTIKKAGSSL PKDEVKRLEK EVDELTKKFV KSAEDMCKSK EKEITEA

Arabidopsis Description

At3g01800 [Source:UniProtKB/TrEMBL;Acc:Q6NQM0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.