Factsheet for AT3G08780.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY36008	Canola	nucleus	79.55	79.3
Bra029720.1-P	Field mustard	nucleus	79.55	79.05
CDY27973	Canola	nucleus	79.23	78.73
VIT_08s0058g00530.t01	Wine grape	cytosol	52.4	53.59
KRH76029	Soybean	nucleus, plastid	46.96	47.88
KRH65583	Soybean	plastid	30.99	47.32
Solyc09g015180.2.1	Tomato	cytosol	42.17	42.17
PGSC0003DMT400044093	Potato	cytosol	42.17	42.17
TraesCS5A01G151000.1	Wheat	cytosol, nucleus, plasma membrane	32.59	35.92
TraesCS5D01G156000.1	Wheat	cytosol	32.59	35.92
TraesCS5B01G149500.1	Wheat	cytosol	32.27	35.56
Os04t0479300-01	Rice	extracellular, nucleus	30.99	35.53
Zm00001d025308_P001	Maize	plastid	16.93	34.19
EES07862	Sorghum	plastid	30.35	33.45
Os07t0540200-01	Rice	cytosol, nucleus, plasma membrane	30.99	33.22
KXG22792	Sorghum	endoplasmic reticulum, peroxisome, plastid	28.75	32.49
Zm00001d044621_P001	Maize	extracellular	29.71	32.4
TraesCS2A01G325500.1	Wheat	plastid	27.8	31.87
TraesCS2D01G337200.1	Wheat	extracellular	28.43	31.45
TraesCS2B01G356400.1	Wheat	endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	25.88	29.56
HORVU2Hr1G082810.2	Barley	cytosol	28.11	29.43
TraesCS1A01G382300.1	Wheat	cytosol	21.73	27.64
TraesCS1B01G407600.1	Wheat	endoplasmic reticulum, plasma membrane	20.77	24.71

Protein Annotations

MapMan:35.2	EntrezGene:820025	UniProt:A0A178V7J1	ProteinID:AEE74678.1	ArrayExpress:AT3G08780	EnsemblPlantsGene:AT3G08780
RefSeq:AT3G08780	TAIR:AT3G08780	RefSeq:AT3G08780-TAIR-G	EnsemblPlants:AT3G08780.1	TAIR:AT3G08780.1	EMBL:AY079028
EMBL:AY102160	Unigene:At.43686	InterPro:FAM175	InterPro:FAM175_plant	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150
GO:GO:0031593	RefSeq:NP_187490.2	ProteinID:OAP01661.1	PO:PO:0000005	PO:PO:0000293	PO:PO:0001016
PO:PO:0001017	PO:PO:0025281	PRINTS:PR02051	PRINTS:PR02054	PANTHER:PTHR31728	PANTHER:PTHR31728:SF1
UniProt:Q8RY09	UniParc:UPI00000AB420	SEG:seg	:	:	:

Description

AT3g08780/F17O14_25 [Source:UniProtKB/TrEMBL;Acc:Q8RY09]

Coordinates

chr3:-:2666063..2667560

Molecular Weight (calculated)

34487.8 Da

IEP (calculated)

7.582

GRAVY (calculated)

-0.362

Length

313 amino acids

Sequence
(BLAST)

001: MDDLSLEKIE ISGPTLASLI QRASSSPSDV DGLIFGQIHR IVSSNLSDDS PADIASSSSS SDQIVATVTS FICSGKTVSF YDPLGRVDSR RIDSLRVDSP
101: DHLIGWFSAR RKTANRPSMR ELAVTSSLSS QFHLPIEDLQ NPRSMNMASS VFFLLTMPLT DQCIHTHEYR AYQFRSSKQR LEPRSVGIVN IGPAFRGHYG
201: SFSPKSGFPP LICELSSSAM SVDCDESSLS AKKQSAKDQK EIDALAEGFQ VGELKRLVGA EAANYTGGIE EMYERMLAKI ESLASDVEKS SARVFQQEKH
301: NRKLRNRVAR IGR

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.