Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY08583 | Canola | extracellular, vacuole | 59.17 | 92.59 |
| CDX73913 | Canola | plastid | 87.57 | 88.1 |
| CDY69136 | Canola | plastid | 65.38 | 77.82 |
| Solyc06g048540.2.1 | Tomato | plastid | 65.09 | 70.51 |
| PGSC0003DMT400070962 | Potato | plastid | 64.2 | 69.55 |
| VIT_13s0084g00110.t01 | Wine grape | plastid | 64.2 | 67.6 |
| KRH60123 | Soybean | plastid | 53.85 | 62.98 |
| KRH41407 | Soybean | plastid | 53.55 | 62.63 |
| TraesCS4B01G171400.1 | Wheat | plastid | 56.8 | 62.54 |
| TraesCS4A01G133200.1 | Wheat | plastid | 57.1 | 62.46 |
| HORVU4Hr1G050780.1 | Barley | plastid | 55.92 | 62.38 |
| KXG39439 | Sorghum | plastid | 55.62 | 62.25 |
| Zm00001d029039_P001 | Maize | plastid | 55.33 | 61.72 |
| Os03t0332700-01 | Rice | plastid | 55.92 | 60.77 |
| TraesCS4D01G173500.1 | Wheat | plastid | 56.51 | 60.63 |
| GSMUA_Achr8P32690_001 | Banana | cytosol, mitochondrion | 31.07 | 51.47 |
| GSMUA_Achr9P00290_001 | Banana | plastid | 38.17 | 50.99 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:7.11.1.1.1.2 | EntrezGene:820236 | UniProt:A0A178VCA7 | InterPro:AAA+_ATPase | ProteinID:AAF19582.1 |
| ProteinID:AAF76373.1 | ProteinID:AAG51398.1 | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AEE74941.1 | ArrayExpress:AT3G10670 |
| EnsemblPlantsGene:AT3G10670 | RefSeq:AT3G10670 | TAIR:AT3G10670 | RefSeq:AT3G10670-TAIR-G | EnsemblPlants:AT3G10670.1 | TAIR:AT3G10670.1 |
| Symbol:ATNAP7 | EMBL:AY035125 | EMBL:AY085010 | EMBL:AY113917 | Unigene:At.21722 | EMBL:BK005580 |
| InterPro:FeS-cluster_ATPase_SufC | GO:GO:0000003 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009570 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010027 |
| GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| RefSeq:NP_187678.1 | ProteinID:OAP03859.1 | InterPro:P-loop_NTPase | PFAM:PF00005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000229 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006079 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020147 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00211 | PFscan:PS50893 | PANTHER:PTHR43204 | PANTHER:PTHR43204:SF1 | UniProt:Q9CAF5 |
| SMART:SM00382 | SUPFAM:SSF52540 | TIGRFAMs:TIGR01978 | UniParc:UPI00000486E2 | SEG:seg | : |
Description
ABCI6ABC transporter I family member 6, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CAF5]
Coordinates
chr3:-:3335004..3337446
Molecular Weight (calculated)
36933.7 Da
IEP (calculated)
7.166
GRAVY (calculated)
-0.078
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVNLQLRH AYSIAQFVPT VSSPPPLPTQ RVRLGTSPSR VLLCNLRANS AAAPILRTTR RSVIVSASSV SSAVDSDSLV EDRDDVGRIP LLEVRDLRAV
101: IAESRQEILK GVNLVVYEGE VHAVMGKNGS GKSTFSKVLV GHPDYEVTGG SIVFKGQNLL DMEPEDRSLA GLFMSFQSPV EIPGVSNMDF LNMAFNARKR
201: KLGQPELDPI QFYSHLVSKL EVVNMKTDFL NRNVNEGFSG GERKRNEILQ LAVLGAELAI LDEIDSGLDV DALQDVAKAV NGLLTPKNSV LMITHYQRLL
301: DYIKPTLIHI MENGRIIKTG DNSLAKLLEK EGYKAISG
101: IAESRQEILK GVNLVVYEGE VHAVMGKNGS GKSTFSKVLV GHPDYEVTGG SIVFKGQNLL DMEPEDRSLA GLFMSFQSPV EIPGVSNMDF LNMAFNARKR
201: KLGQPELDPI QFYSHLVSKL EVVNMKTDFL NRNVNEGFSG GERKRNEILQ LAVLGAELAI LDEIDSGLDV DALQDVAKAV NGLLTPKNSV LMITHYQRLL
301: DYIKPTLIHI MENGRIIKTG DNSLAKLLEK EGYKAISG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.