Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53616 | Canola | plastid | 81.66 | 81.66 |
| Bra023936.1-P | Field mustard | plastid | 79.88 | 79.88 |
| CDY43066 | Canola | plastid | 78.4 | 79.82 |
| PGSC0003DMT400041419 | Potato | cytosol | 23.08 | 62.4 |
| VIT_19s0014g05110.t01 | Wine grape | plastid | 56.21 | 56.05 |
| KRH22230 | Soybean | plastid | 52.66 | 52.51 |
| Solyc12g005240.1.1 | Tomato | plastid | 49.41 | 52.02 |
| PGSC0003DMT400056133 | Potato | plastid | 49.41 | 51.38 |
| KRH27109 | Soybean | plastid | 51.78 | 50.58 |
| GSMUA_Achr6P00560_001 | Banana | plastid | 48.52 | 48.38 |
| EES19766 | Sorghum | plastid | 42.31 | 40.51 |
| Os05t0500400-01 | Rice | plastid | 39.94 | 39.71 |
| TraesCS1B01G331700.1 | Wheat | plastid | 39.94 | 39.59 |
| HORVU1Hr1G066510.7 | Barley | mitochondrion | 41.42 | 39.55 |
| TraesCS1A01G319400.1 | Wheat | plastid | 39.05 | 38.6 |
| TraesCS1D01G319200.1 | Wheat | plastid | 39.05 | 38.6 |
| Zm00001d038606_P001 | Maize | plastid | 39.05 | 38.37 |
Protein Annotations
| MapMan:35.2 | EntrezGene:821615 | UniProt:A0A178V912 | ProteinID:AEE76411.1 | ArrayExpress:AT3G20680 | EnsemblPlantsGene:AT3G20680 |
| RefSeq:AT3G20680 | TAIR:AT3G20680 | RefSeq:AT3G20680-TAIR-G | EnsemblPlants:AT3G20680.1 | TAIR:AT3G20680.1 | EMBL:AY058855 |
| EMBL:AY143863 | Unigene:At.6771 | ProteinID:BAB02244.1 | InterPro:DUF1995 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | RefSeq:NP_188704.1 |
| ProteinID:OAP02396.1 | PFAM:PF09353 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000191 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR36365 | UniProt:Q9LHQ4 | UniParc:UPI00000AC0DC | SEG:seg |
Description
AT3g20680/F3H11_7 [Source:UniProtKB/TrEMBL;Acc:Q9LHQ4]
Coordinates
chr3:-:7230068..7231194
Molecular Weight (calculated)
37438.2 Da
IEP (calculated)
10.155
GRAVY (calculated)
-0.171
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSTLFKLN SQTFKALNPS PPSLSPPNSR IFHLHFSKSL SQQHSKLNHK STTTRLFAPL CSSLPSPSSS SPPLSKEEAI NQAKTCLLSC LIKPLNNPKL
101: ASPKLRKLKQ PRFRLEIPIL DDDSPSSLSQ LAFSIFHDLP ISRRGSNVKL LFLWPNPSFI DPAVKAFRSD SIHHIAMSPV SDSLKTALRS ADVAIFMAPE
201: KSQLEDVKTA SEAFSTKPVV MINPRWLFEE EKSFGDGFIG SFEVIYAFTG LEVRGVFSKR KGVIFKCVRD GVVSGERWNV LVEEEEGNGT LKVVSQFNSR
301: PSIEEVELVL YNLMAMNSPI TKSAKFLSDL VSNITGKK
101: ASPKLRKLKQ PRFRLEIPIL DDDSPSSLSQ LAFSIFHDLP ISRRGSNVKL LFLWPNPSFI DPAVKAFRSD SIHHIAMSPV SDSLKTALRS ADVAIFMAPE
201: KSQLEDVKTA SEAFSTKPVV MINPRWLFEE EKSFGDGFIG SFEVIYAFTG LEVRGVFSKR KGVIFKCVRD GVVSGERWNV LVEEEEGNGT LKVVSQFNSR
301: PSIEEVELVL YNLMAMNSPI TKSAKFLSDL VSNITGKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.