Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY53616 | Canola | plastid | 95.18 | 93.49 |
| AT3G20680.1 | Thale cress | plastid | 79.82 | 78.4 |
| PGSC0003DMT400041419 | Potato | cytosol | 23.49 | 62.4 |
| VIT_19s0014g05110.t01 | Wine grape | plastid | 56.02 | 54.87 |
| KRH22230 | Soybean | plastid | 54.52 | 53.39 |
| Solyc12g005240.1.1 | Tomato | plastid | 50.3 | 52.02 |
| KRH27109 | Soybean | plastid | 54.22 | 52.02 |
| PGSC0003DMT400056133 | Potato | plastid | 49.4 | 50.46 |
| GSMUA_Achr6P00560_001 | Banana | plastid | 49.1 | 48.08 |
| EES19766 | Sorghum | plastid | 43.37 | 40.79 |
| Os05t0500400-01 | Rice | plastid | 41.27 | 40.29 |
| TraesCS1B01G331700.1 | Wheat | plastid | 41.27 | 40.18 |
| TraesCS1A01G319400.1 | Wheat | plastid | 40.96 | 39.77 |
| TraesCS1D01G319200.1 | Wheat | plastid | 40.66 | 39.47 |
| HORVU1Hr1G066510.7 | Barley | mitochondrion | 41.87 | 39.27 |
| Zm00001d038606_P001 | Maize | plastid | 40.06 | 38.66 |
Protein Annotations
| EnsemblPlants:CDY43066 | EnsemblPlantsGene:GSBRNA2T00075899001 | InterPro:DUF1995 | PANTHER:PTHR36365 | PFAM:PF09353 | ProteinID:CDY43066 |
| ProteinID:CDY43066.1 | SEG:seg | UniParc:UPI0004EBCBE6 | UniProt:A0A078HZU6 | MapMan:35.2 | : |
Description
BnaCnng10720DBnaCnng10720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZU6]
Coordinates
chrLK032544:+:1551..3774
Molecular Weight (calculated)
36954.6 Da
IEP (calculated)
10.072
GRAVY (calculated)
-0.248
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSTPFKFH SQTFKTPNPS PPRISHLHFP NSVSHHSRRL NKESTTRTRF LAPLCSSLPS PSSPPASKEE AILQAKTCLS SCLLKPLNNP KLASPKLKKL
101: KQPRFRLEIP ILDDDSPSSL SQLAFSIFSD MPISRRGSNA VVRLLFLWPD PSFVEPAVKA FRSDNTNHIA MSPVSEPLNK ALKTADVAVF MAPERSQLED
201: VRVSTEGFAT KPVVMINPRW LFEEEKSFGD DFVGSFDVVY AFTGLEVRGI LSKRKGVIFK CVRDGVVSGE RWNVLVEEEE GDGALKVVSQ FKARPSMEEV
301: ELVLYNLMAM NSPITKSAKF FKDLVSNITG KK
101: KQPRFRLEIP ILDDDSPSSL SQLAFSIFSD MPISRRGSNA VVRLLFLWPD PSFVEPAVKA FRSDNTNHIA MSPVSEPLNK ALKTADVAVF MAPERSQLED
201: VRVSTEGFAT KPVVMINPRW LFEEEKSFGD DFVGSFDVVY AFTGLEVRGI LSKRKGVIFK CVRDGVVSGE RWNVLVEEEE GDGALKVVSQ FKARPSMEEV
301: ELVLYNLMAM NSPITKSAKF FKDLVSNITG KK
001: MASSTLFKLN SQTFKALNPS PPSLSPPNSR IFHLHFSKSL SQQHSKLNHK STTTRLFAPL CSSLPSPSSS SPPLSKEEAI NQAKTCLLSC LIKPLNNPKL
101: ASPKLRKLKQ PRFRLEIPIL DDDSPSSLSQ LAFSIFHDLP ISRRGSNVKL LFLWPNPSFI DPAVKAFRSD SIHHIAMSPV SDSLKTALRS ADVAIFMAPE
201: KSQLEDVKTA SEAFSTKPVV MINPRWLFEE EKSFGDGFIG SFEVIYAFTG LEVRGVFSKR KGVIFKCVRD GVVSGERWNV LVEEEEGNGT LKVVSQFNSR
301: PSIEEVELVL YNLMAMNSPI TKSAKFLSDL VSNITGKK
101: ASPKLRKLKQ PRFRLEIPIL DDDSPSSLSQ LAFSIFHDLP ISRRGSNVKL LFLWPNPSFI DPAVKAFRSD SIHHIAMSPV SDSLKTALRS ADVAIFMAPE
201: KSQLEDVKTA SEAFSTKPVV MINPRWLFEE EKSFGDGFIG SFEVIYAFTG LEVRGVFSKR KGVIFKCVRD GVVSGERWNV LVEEEEGNGT LKVVSQFNSR
301: PSIEEVELVL YNLMAMNSPI TKSAKFLSDL VSNITGKK
Arabidopsis Description
AT3g20680/F3H11_7 [Source:UniProtKB/TrEMBL;Acc:Q9LHQ4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.