Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G20680.1 | KRH08874 | AT4G25680.1 | 21798944 |
| AT3G20680.1 | KRH35244 | AT4G25680.1 | 21798944 |
| AT3G20680.1 | KRH38387 | AT4G25680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22230 | Soybean | plastid | 91.04 | 92.92 |
| PGSC0003DMT400041419 | Potato | cytosol | 25.43 | 70.4 |
| VIT_19s0014g05110.t01 | Wine grape | plastid | 62.72 | 64.01 |
| Solyc12g005240.1.1 | Tomato | plastid | 56.65 | 61.06 |
| PGSC0003DMT400056133 | Potato | plastid | 54.62 | 58.15 |
| CDY53616 | Canola | plastid | 53.18 | 54.44 |
| CDY43066 | Canola | plastid | 52.02 | 54.22 |
| Bra023936.1-P | Field mustard | plastid | 52.89 | 54.14 |
| AT3G20680.1 | Thale cress | plastid | 50.58 | 51.78 |
| GSMUA_Achr6P00560_001 | Banana | plastid | 50.0 | 51.03 |
| TraesCS1B01G331700.1 | Wheat | plastid | 41.04 | 41.64 |
| TraesCS1D01G319200.1 | Wheat | plastid | 40.75 | 41.23 |
| TraesCS1A01G319400.1 | Wheat | plastid | 40.17 | 40.64 |
| Os05t0500400-01 | Rice | plastid | 39.6 | 40.29 |
| HORVU1Hr1G066510.7 | Barley | mitochondrion | 41.04 | 40.11 |
| EES19766 | Sorghum | plastid | 40.75 | 39.94 |
| Zm00001d038606_P001 | Maize | plastid | 38.15 | 38.37 |
Protein Annotations
| EMBL:ACUP02007773 | EnsemblPlants:KRH27109 | EnsemblPlantsGene:GLYMA_12G214800 | InterPro:DUF1995 | PANTHER:PTHR36365 | PFAM:PF09353 |
| ProteinID:KRH27109 | ProteinID:KRH27109.1 | SEG:seg | UniParc:UPI0006EE0115 | UniProt:A0A0R0HIC0 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr12:-:37423936..37425176
Molecular Weight (calculated)
38466.7 Da
IEP (calculated)
9.135
GRAVY (calculated)
-0.001
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSYLHATH FQSIQICKLT SCLPPHSNAQ ITSIPFPTTH YLYNHCNSFI IPLSFTVPLK ALSTSIHSSL SSPKPPITKE DAILQAKTSL SATLEKPLNN
101: TKLIGKFKKL RQPKFRVEIP VIDDSPDSLS QLALDFFGDM PIKRKGSPIK ILILWPDASL KESATIGFQS HSTFEHIDIP SVTKTDPRIL NSADVAIFLA
201: PESSQLALIR RVSDAFYPKP LVLFNPKWAF EEESNFGDLS GFVDSFEVVY SFMGLEVRGI LSKRKGVIFK CVRDGVVSGE RWNVFVEEGE ELKVVSSFKA
301: RPTIVEVENV LYNLMAINSP ITKSAKFIKG LVSNVTGKKC NTMTIV
101: TKLIGKFKKL RQPKFRVEIP VIDDSPDSLS QLALDFFGDM PIKRKGSPIK ILILWPDASL KESATIGFQS HSTFEHIDIP SVTKTDPRIL NSADVAIFLA
201: PESSQLALIR RVSDAFYPKP LVLFNPKWAF EEESNFGDLS GFVDSFEVVY SFMGLEVRGI LSKRKGVIFK CVRDGVVSGE RWNVFVEEGE ELKVVSSFKA
301: RPTIVEVENV LYNLMAINSP ITKSAKFIKG LVSNVTGKKC NTMTIV
001: MASSTLFKLN SQTFKALNPS PPSLSPPNSR IFHLHFSKSL SQQHSKLNHK STTTRLFAPL CSSLPSPSSS SPPLSKEEAI NQAKTCLLSC LIKPLNNPKL
101: ASPKLRKLKQ PRFRLEIPIL DDDSPSSLSQ LAFSIFHDLP ISRRGSNVKL LFLWPNPSFI DPAVKAFRSD SIHHIAMSPV SDSLKTALRS ADVAIFMAPE
201: KSQLEDVKTA SEAFSTKPVV MINPRWLFEE EKSFGDGFIG SFEVIYAFTG LEVRGVFSKR KGVIFKCVRD GVVSGERWNV LVEEEEGNGT LKVVSQFNSR
301: PSIEEVELVL YNLMAMNSPI TKSAKFLSDL VSNITGKK
101: ASPKLRKLKQ PRFRLEIPIL DDDSPSSLSQ LAFSIFHDLP ISRRGSNVKL LFLWPNPSFI DPAVKAFRSD SIHHIAMSPV SDSLKTALRS ADVAIFMAPE
201: KSQLEDVKTA SEAFSTKPVV MINPRWLFEE EKSFGDGFIG SFEVIYAFTG LEVRGVFSKR KGVIFKCVRD GVVSGERWNV LVEEEEGNGT LKVVSQFNSR
301: PSIEEVELVL YNLMAMNSPI TKSAKFLSDL VSNITGKK
Arabidopsis Description
AT3g20680/F3H11_7 [Source:UniProtKB/TrEMBL;Acc:Q9LHQ4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.