Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G20680.1 | KRH08874 | AT4G25680.1 | 21798944 |
| AT3G20680.1 | KRH35244 | AT4G25680.1 | 21798944 |
| AT3G20680.1 | KRH38387 | AT4G25680.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27109 | Soybean | plastid | 92.92 | 91.04 |
| PGSC0003DMT400041419 | Potato | cytosol | 25.66 | 69.6 |
| VIT_19s0014g05110.t01 | Wine grape | plastid | 63.42 | 63.42 |
| Solyc12g005240.1.1 | Tomato | plastid | 56.64 | 59.81 |
| PGSC0003DMT400056133 | Potato | plastid | 55.16 | 57.54 |
| CDY53616 | Canola | plastid | 54.57 | 54.73 |
| CDY43066 | Canola | plastid | 53.39 | 54.52 |
| Bra023936.1-P | Field mustard | plastid | 54.28 | 54.44 |
| AT3G20680.1 | Thale cress | plastid | 52.51 | 52.66 |
| GSMUA_Achr6P00560_001 | Banana | plastid | 51.33 | 51.33 |
| TraesCS1B01G331700.1 | Wheat | plastid | 41.89 | 41.64 |
| TraesCS1D01G319200.1 | Wheat | plastid | 41.59 | 41.23 |
| Os05t0500400-01 | Rice | plastid | 41.0 | 40.88 |
| EES19766 | Sorghum | plastid | 42.48 | 40.79 |
| TraesCS1A01G319400.1 | Wheat | plastid | 41.0 | 40.64 |
| HORVU1Hr1G066510.7 | Barley | mitochondrion | 41.89 | 40.11 |
| Zm00001d038606_P001 | Maize | plastid | 40.12 | 39.53 |
Protein Annotations
| EMBL:ACUP02008395 | EnsemblPlants:KRH22230 | EnsemblPlantsGene:GLYMA_13G286800 | EntrezGene:100784062 | InterPro:DUF1995 | PANTHER:PTHR36365 |
| PFAM:PF09353 | ProteinID:KRH22230 | ProteinID:KRH22230.1 | SEG:seg | UniParc:UPI000233BC09 | UniProt:A0A0R0GVS1 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:38724716..38725735
Molecular Weight (calculated)
37552.4 Da
IEP (calculated)
9.647
GRAVY (calculated)
-0.093
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSYLHTTH FQSIQICKPS SCLPPHSNTQ TTSIPFPTTH YLYKHCNSSH IPLSSIVPLK ATSTSIHSSL SSPKPPITKE DAILQAKTSL SATLEKPLNN
101: PKLIGKFKKL RQPKFRVEIP VIDDSPDSLS QLALDFFGDM PIKRKGSPIK ILMLWPDASL KESATIAFQS HSTFEHIDIP SVAKTDPRIL NSADVAIFLA
201: PESSQLAPIR RVSDAFYPKP VVLFNPKWAF EEESNLGDLS GFVDSFEVVY SFIGLEVRGI LSKRKGVIFK CVRDGVVSGE RWNVFVEEGQ ELKVVSSFKV
301: RPTIVEVENV LYNLMAINSP ITKSAKFIQG LVSNVTGRK
101: PKLIGKFKKL RQPKFRVEIP VIDDSPDSLS QLALDFFGDM PIKRKGSPIK ILMLWPDASL KESATIAFQS HSTFEHIDIP SVAKTDPRIL NSADVAIFLA
201: PESSQLAPIR RVSDAFYPKP VVLFNPKWAF EEESNLGDLS GFVDSFEVVY SFIGLEVRGI LSKRKGVIFK CVRDGVVSGE RWNVFVEEGQ ELKVVSSFKV
301: RPTIVEVENV LYNLMAINSP ITKSAKFIQG LVSNVTGRK
001: MASSTLFKLN SQTFKALNPS PPSLSPPNSR IFHLHFSKSL SQQHSKLNHK STTTRLFAPL CSSLPSPSSS SPPLSKEEAI NQAKTCLLSC LIKPLNNPKL
101: ASPKLRKLKQ PRFRLEIPIL DDDSPSSLSQ LAFSIFHDLP ISRRGSNVKL LFLWPNPSFI DPAVKAFRSD SIHHIAMSPV SDSLKTALRS ADVAIFMAPE
201: KSQLEDVKTA SEAFSTKPVV MINPRWLFEE EKSFGDGFIG SFEVIYAFTG LEVRGVFSKR KGVIFKCVRD GVVSGERWNV LVEEEEGNGT LKVVSQFNSR
301: PSIEEVELVL YNLMAMNSPI TKSAKFLSDL VSNITGKK
101: ASPKLRKLKQ PRFRLEIPIL DDDSPSSLSQ LAFSIFHDLP ISRRGSNVKL LFLWPNPSFI DPAVKAFRSD SIHHIAMSPV SDSLKTALRS ADVAIFMAPE
201: KSQLEDVKTA SEAFSTKPVV MINPRWLFEE EKSFGDGFIG SFEVIYAFTG LEVRGVFSKR KGVIFKCVRD GVVSGERWNV LVEEEEGNGT LKVVSQFNSR
301: PSIEEVELVL YNLMAMNSPI TKSAKFLSDL VSNITGKK
Arabidopsis Description
AT3g20680/F3H11_7 [Source:UniProtKB/TrEMBL;Acc:Q9LHQ4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.