Factsheet for HORVU1Hr1G066510.7

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	mitochondrion
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G002080.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G20680.1	HORVU7Hr1G002080.2	AT4G25680.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G331700.1	Wheat	plastid	79.1	82.11
TraesCS1A01G319400.1	Wheat	plastid	79.1	81.87
TraesCS1D01G319200.1	Wheat	plastid	78.53	81.29
Os05t0500400-01	Rice	plastid	61.02	63.53
EES19766	Sorghum	plastid	61.3	61.47
Zm00001d038606_P001	Maize	plastid	58.47	60.17
PGSC0003DMT400041419	Potato	cytosol	18.08	51.2
GSMUA_Achr6P00560_001	Banana	plastid	42.94	44.84
VIT_19s0014g05110.t01	Wine grape	plastid	42.37	44.25
Solyc12g005240.1.1	Tomato	plastid	39.27	43.3
KRH22230	Soybean	plastid	40.11	41.89
CDY43066	Canola	plastid	39.27	41.87
PGSC0003DMT400056133	Potato	plastid	38.42	41.85
CDY53616	Canola	plastid	39.55	41.42
AT3G20680.1	Thale cress	plastid	39.55	41.42
KRH27109	Soybean	plastid	40.11	41.04
Bra023936.1-P	Field mustard	plastid	38.98	40.83

Protein Annotations

EnsemblPlants:HORVU1Hr1G066510.7	EnsemblPlantsGene:HORVU1Hr1G066510	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	InterPro:DUF1995	PANTHER:PTHR36365	PFAM:PF09353	SEG:seg
UniParc:UPI000B47EAFD	UniProt:A0A287G0Z7	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:472949048..472950919

Molecular Weight (calculated)

38030.1 Da

IEP (calculated)

10.544

GRAVY (calculated)

-0.199

Length

354 amino acids

Sequence
(BLAST)

001: QQLDQRSPPY RLLLAPMALS LLNPAPSRIA LKAAGPPPLS RSFLLLTPRL PALLLRSRPP GRVQSSSAAA PSAPTDGSPT PPSSREEAVA QARSCLATAL
101: RKPLNNSLPA RKGKKQQRQP RFRAEIPVVD DSPGSLARLA FDVFSGLGVS RKGSPARLLL VWPSAGDLAV AVREFESWGD SSALAHAQLD SVAPDALGAC
201: DAAVFIAPGR PQVEKLRAAV NALDPKPAVL FNPGWTYEVE EEGFGGIAKG FVGSFNVVYS FMGLEVKGLL SKKKGVLLRC VEGGRFGGES WVLMMEDEEK
301: EPELKVVSRM KRRPTTGEVE NMMYNLMAAN SPVTKSARFL RELVSNVTGR KGKE

Best Arabidopsis Sequence Match ( AT3G20680.1 )
(BLAST)

001: MASSTLFKLN SQTFKALNPS PPSLSPPNSR IFHLHFSKSL SQQHSKLNHK STTTRLFAPL CSSLPSPSSS SPPLSKEEAI NQAKTCLLSC LIKPLNNPKL
101: ASPKLRKLKQ PRFRLEIPIL DDDSPSSLSQ LAFSIFHDLP ISRRGSNVKL LFLWPNPSFI DPAVKAFRSD SIHHIAMSPV SDSLKTALRS ADVAIFMAPE
201: KSQLEDVKTA SEAFSTKPVV MINPRWLFEE EKSFGDGFIG SFEVIYAFTG LEVRGVFSKR KGVIFKCVRD GVVSGERWNV LVEEEEGNGT LKVVSQFNSR
301: PSIEEVELVL YNLMAMNSPI TKSAKFLSDL VSNITGKK

Arabidopsis Description

AT3g20680/F3H11_7 [Source:UniProtKB/TrEMBL;Acc:Q9LHQ4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.