Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra033840.1-P | Field mustard | nucleus | 81.39 | 80.13 |
CDY53836 | Canola | nucleus | 80.04 | 78.81 |
CDX86010 | Canola | nucleus | 78.92 | 78.57 |
AT5G60470.2 | Thale cress | nucleus | 58.97 | 57.3 |
AT4G02670.2 | Thale cress | nucleus, plastid | 37.67 | 41.58 |
AT3G50700.1 | Thale cress | nucleus | 41.48 | 40.93 |
Bra038293.1-P | Field mustard | nucleus | 79.6 | 40.07 |
AT1G55110.2 | Thale cress | nucleus | 39.69 | 38.9 |
AT5G44160.1 | Thale cress | nucleus | 39.46 | 37.77 |
AT5G66730.1 | Thale cress | nucleus | 41.03 | 36.6 |
AT1G03840.1 | Thale cress | nucleus | 41.03 | 36.17 |
AT5G03150.1 | Thale cress | nucleus | 40.36 | 35.79 |
AT2G02080.3 | Thale cress | nucleus, plastid | 38.79 | 33.53 |
AT1G14580.3 | Thale cress | nucleus | 35.2 | 32.64 |
AT3G13810.2 | Thale cress | nucleus | 37.44 | 32.49 |
AT2G02070.2 | Thale cress | nucleus | 41.26 | 30.56 |
AT1G25250.3 | Thale cress | nucleus | 25.34 | 29.35 |
AT2G01940.3 | Thale cress | nucleus | 27.8 | 27.8 |
AT1G68130.1 | Thale cress | nucleus | 24.66 | 26.25 |
Protein Annotations
MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:823664 | ProteinID:AEE78015.1 | EMBL:AF428302 | EMBL:AJ621493 |
ProteinID:ANM65354.1 | ArrayExpress:AT3G45260 | EnsemblPlantsGene:AT3G45260 | RefSeq:AT3G45260 | TAIR:AT3G45260 | RefSeq:AT3G45260-TAIR-G |
EnsemblPlants:AT3G45260.1 | TAIR:AT3G45260.1 | EMBL:AY143936 | Unigene:At.22283 | ProteinID:CAB72475.1 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0046872 | InterPro:IPR013087 |
InterPro:JKD-like | RefSeq:NP_001327332.1 | RefSeq:NP_566877.1 | PFAM:PF12171 | PO:PO:0000013 | PO:PO:0000037 |
PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009047 | PO:PO:0020030 |
PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 |
PANTHER:PTHR10593:SF42 | UniProt:Q944L3 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI00000AC0B9 | InterPro:Znf_C2H2_jaz |
InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
IDD9Protein indeterminate-domain 9 [Source:UniProtKB/Swiss-Prot;Acc:Q944L3]
Coordinates
chr3:-:16596358..16598811
Molecular Weight (calculated)
49943.4 Da
IEP (calculated)
9.855
GRAVY (calculated)
-0.898
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMPDDHHPL SFPSYVLHQE HIAPNPNPNP NPTSSNSAKR KRNLPGNPDP DAEVIALSPN SLMTTNRFIC EVCNKGFKRD QNLQLHRRGH NLPWKLKQRT
101: NKEQVKKKVY ICPEKTCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC SKKYAVMSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDALAEES
201: ARFVSVPPAP AYLNNALDVE VNHGNINQNH QQRQLNTTSS QLDQPGFNTN RNNIAFLGQT LPTNVFASSS SPSPRSASDS LQNLWHLQGQ SSHQWLLNEN
301: NNNNNNILQR GISKNQEEHE MKNVISNGSL FSSEARNNTN NYNQNGGQIA SMSATALLQK AAQMGSKRSS SSSSNSKTFG LMTSIFNNKQ AENIKTKEVD
401: ERGFTRDFLG VGSQHRSWPL LMVNHNLPDS SPPASTDGTP TADMNQ
101: NKEQVKKKVY ICPEKTCVHH DPARALGDLT GIKKHFSRKH GEKKWKCDKC SKKYAVMSDW KAHSKICGTK EYRCDCGTLF SRKDSFITHR AFCDALAEES
201: ARFVSVPPAP AYLNNALDVE VNHGNINQNH QQRQLNTTSS QLDQPGFNTN RNNIAFLGQT LPTNVFASSS SPSPRSASDS LQNLWHLQGQ SSHQWLLNEN
301: NNNNNNILQR GISKNQEEHE MKNVISNGSL FSSEARNNTN NYNQNGGQIA SMSATALLQK AAQMGSKRSS SSSSNSKTFG LMTSIFNNKQ AENIKTKEVD
401: ERGFTRDFLG VGSQHRSWPL LMVNHNLPDS SPPASTDGTP TADMNQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.