Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37489 | Canola | nucleus | 31.91 | 89.13 |
| CDY51742 | Canola | nucleus | 78.6 | 83.47 |
| CDX82515 | Canola | nucleus | 71.21 | 82.99 |
| Bra021510.1-P | Field mustard | nucleus | 81.91 | 82.55 |
| CDX97521 | Canola | nucleus | 76.65 | 81.24 |
| CDY55238 | Canola | nucleus | 75.88 | 80.25 |
| Bra027394.1-P | Field mustard | nucleus | 78.79 | 80.2 |
| Bra001523.1-P | Field mustard | nucleus | 79.57 | 79.88 |
| CDX75732 | Canola | nucleus | 68.68 | 79.68 |
| AT1G55110.2 | Thale cress | nucleus | 57.59 | 65.05 |
| AT4G02670.2 | Thale cress | nucleus, plastid | 32.68 | 41.58 |
| AT3G50700.1 | Thale cress | nucleus | 35.41 | 40.27 |
| AT3G45260.1 | Thale cress | nucleus | 32.49 | 37.44 |
| AT1G03840.1 | Thale cress | nucleus | 36.77 | 37.35 |
| AT5G44160.1 | Thale cress | nucleus | 33.46 | 36.91 |
| VIT_09s0002g02300.t01 | Wine grape | nucleus | 37.55 | 36.28 |
| AT5G66730.1 | Thale cress | nucleus | 35.21 | 36.2 |
| AT5G03150.1 | Thale cress | nucleus | 35.41 | 36.18 |
| AT5G60470.2 | Thale cress | nucleus | 29.96 | 33.55 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 33.27 | 33.14 |
| AT1G14580.3 | Thale cress | nucleus | 30.16 | 32.22 |
| AT2G02070.2 | Thale cress | nucleus | 36.97 | 31.56 |
| AT1G25250.3 | Thale cress | nucleus | 21.01 | 28.05 |
| AT1G68130.1 | Thale cress | nucleus | 21.01 | 25.78 |
| AT2G01940.3 | Thale cress | nucleus | 21.6 | 24.89 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:820593 | ProteinID:AEE75419.1 | ArrayExpress:AT3G13810 | EnsemblPlantsGene:AT3G13810 |
| RefSeq:AT3G13810 | TAIR:AT3G13810 | RefSeq:AT3G13810-TAIR-G | EnsemblPlants:AT3G13810.2 | TAIR:AT3G13810.2 | Unigene:At.28709 |
| Symbol:AtIDD11 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | Symbol:IDD11 | InterPro:IPR013087 |
| RefSeq:NP_001189882.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0025022 |
| PO:PO:0025281 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF49 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0001E92ED7 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
AtIDD11indeterminate(ID)-domain 11 [Source:TAIR;Acc:AT3G13810]
Coordinates
chr3:+:4544364..4547513
Molecular Weight (calculated)
56944.2 Da
IEP (calculated)
8.036
GRAVY (calculated)
-0.766
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLHQHQQPQ QDENMSNLTS ASGDQASVSS GNITEASGSN YFPHHQQQQE QQQQQIQKLS CSWTDSLFQL FDTVTFLEIL YPESEVIALS PKTLMATNRF
101: VCEICNKGFQ RDQNLQLHRR GHNLPWKLKQ RSNKEVIRKK VYVCPEASCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DCKAHSKTCG
201: TKEYRCDCGT LFSRRDSFIT HRAFCEALAE ETAREVVIPQ NQNNNQPNPL LIHQSASHPH HHHQTQPTIN VSSSSSSSHN HNIINSLHFD TNNGNTNNSN
301: NSNNHLHTFP MKKEQQSNDH IMNYHHSIIP PWLAPQPHAL TSSNPNPSNG GGGGGSLFSL ASPAMSATAL LQKAAQMGST KTPPLPPTTA YERSTHNNNL
401: TTTMAAMMTS PSGFISSNNN NHVLFQDYNA SGFDNHGREE AFDDTFGGFL RTNEVTAAAG SEKSTKSGGG EGLTRDFLGL RPLMSHNEIL SFAGLGSCIN
501: SSASDQLHPK PWQG
101: VCEICNKGFQ RDQNLQLHRR GHNLPWKLKQ RSNKEVIRKK VYVCPEASCV HHDPSRALGD LTGIKKHFCR KHGEKKWKCD KCSKKYAVQS DCKAHSKTCG
201: TKEYRCDCGT LFSRRDSFIT HRAFCEALAE ETAREVVIPQ NQNNNQPNPL LIHQSASHPH HHHQTQPTIN VSSSSSSSHN HNIINSLHFD TNNGNTNNSN
301: NSNNHLHTFP MKKEQQSNDH IMNYHHSIIP PWLAPQPHAL TSSNPNPSNG GGGGGSLFSL ASPAMSATAL LQKAAQMGST KTPPLPPTTA YERSTHNNNL
401: TTTMAAMMTS PSGFISSNNN NHVLFQDYNA SGFDNHGREE AFDDTFGGFL RTNEVTAAAG SEKSTKSGGG EGLTRDFLGL RPLMSHNEIL SFAGLGSCIN
501: SSASDQLHPK PWQG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.