Factsheet for AT1G68130.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96046	Canola	nucleus	50.36	90.56
CDY07400	Canola	nucleus	86.4	87.65
Bra004050.1-P	Field mustard	nucleus	86.4	87.65
Bra004283.1-P	Field mustard	nucleus	86.16	87.62
CDY04204	Canola	nucleus	74.7	87.19
CDY04203	Canola	plastid	77.09	83.9
AT1G25250.3	Thale cress	nucleus	57.52	62.6
VIT_01s0011g06400.t01	Wine grape	nucleus	57.04	56.24
GSMUA_Achr6P02490_001	Banana	nucleus	48.21	54.59
GSMUA_Achr7P18610_001	Banana	nucleus	49.16	54.5
GSMUA_Achr5P23130_001	Banana	nucleus	48.21	53.16
KRH58582	Soybean	nucleus	55.61	52.95
KRH42485	Soybean	nucleus	56.09	51.99
GSMUA_Achr10P...	Banana	nucleus	47.26	51.7
AT2G01940.3	Thale cress	nucleus	54.89	51.57
GSMUA_Achr3P20220_001	Banana	nucleus	49.88	49.29
GSMUA_Achr2P21680_001	Banana	nucleus, plastid	43.44	47.52
GSMUA_Achr10P...	Banana	nucleus	43.2	45.36
Solyc05g054030.2.1	Tomato	nucleus	40.1	44.09
Zm00001d005871_P002	Maize	nucleus	46.06	43.76
TraesCS4B01G230800.1	Wheat	nucleus, plastid	42.24	43.7
TraesCS5A01G233700.1	Wheat	nucleus	50.12	42.77
TraesCS4D01G232000.1	Wheat	nucleus, plastid	42.24	42.75
TraesCS5D01G240600.1	Wheat	nucleus	49.88	42.57
TraesCS4A01G074700.1	Wheat	nucleus, plastid	41.77	42.17
TraesCS5B01G232200.1	Wheat	nucleus	49.4	42.07
Os03t0237250-01	Rice	plastid	43.91	42.01
HORVU4Hr1G064740.2	Barley	nucleus, plastid	42.48	41.88
Zm00001d020683_P001	Maize	nucleus	49.4	41.65
Zm00001d028361_P001	Maize	nucleus, plastid	44.87	41.59
EER96827	Sorghum	nucleus	49.4	41.48
Zm00001d047976_P001	Maize	nucleus, plastid	44.15	41.29
KXG39813	Sorghum	nucleus, plastid	44.39	40.52
Zm00001d031759_P001	Maize	nucleus	49.4	39.96
Os08t0467100-01	Rice	nucleus	49.64	39.02
EES13982	Sorghum	nucleus	49.88	38.99
AT4G02670.2	Thale cress	nucleus, plastid	26.25	27.23
AT3G50700.1	Thale cress	nucleus	27.21	25.22
AT5G44160.1	Thale cress	nucleus	27.68	24.89
AT3G45260.1	Thale cress	nucleus	26.25	24.66
AT1G55110.2	Thale cress	nucleus	26.01	23.96
AT5G66730.1	Thale cress	nucleus	27.92	23.4
AT5G60470.2	Thale cress	nucleus	25.3	23.09
AT1G03840.1	Thale cress	nucleus	26.73	22.13
AT5G03150.1	Thale cress	nucleus	25.3	21.07
AT3G13810.2	Thale cress	nucleus	25.78	21.01
AT1G14580.3	Thale cress	nucleus	23.63	20.58
AT2G02080.3	Thale cress	nucleus, plastid	25.06	20.35
AT2G02070.2	Thale cress	nucleus	25.54	17.77

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EntrezGene:843141	UniProt:A0A178WFX0	ProteinID:AAG51998.1	EMBL:AB493524
ProteinID:AEE34752.1	ProteinID:AEE34753.1	ArrayExpress:AT1G68130	EnsemblPlantsGene:AT1G68130	RefSeq:AT1G68130	TAIR:AT1G68130
RefSeq:AT1G68130-TAIR-G	EnsemblPlants:AT1G68130.1	TAIR:AT1G68130.1	Unigene:At.23507	Symbol:AtIDD14	EMBL:BT026478
ncoils:Coil	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005975	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006810	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628
GO:GO:0009630	GO:GO:0009653	GO:GO:0009791	GO:GO:0009908	GO:GO:0009965	GO:GO:0009987
GO:GO:0010601	GO:GO:0043621	GO:GO:0044212	GO:GO:0046872	GO:GO:0046982	GO:GO:0048444
GO:GO:2000012	GO:GO:2000904	InterPro:IPR013087	RefSeq:NP_001077791.1	RefSeq:NP_176980.1	ProteinID:OAP16445.1
PFAM:PF00096	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000258	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0003015	PO:PO:0004507
PO:PO:0005059	PO:PO:0006203	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020124	PO:PO:0020137	PO:PO:0025022	PO:PO:0025257
PO:PO:0025281	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF43	UniProt:Q9C9X7
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI00000A4E86	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg

Description

IDD14Protein indeterminate-domain 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X7]

Coordinates

chr1:+:25532008..25534678

Molecular Weight (calculated)

47560.8 Da

IEP (calculated)

8.498

GRAVY (calculated)

-0.963

Length

419 amino acids

Sequence
(BLAST)

001: MIDYERSNTT KNINTHHHNP PPSSSSSDLL PDGNGTAVTQ KRKRRPAGTP DPEAEVVSLS PRTLLESDRY VCEICNQGFQ RDQNLQMHRR RHKVPWKLLK
101: RETNEEVRKR VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSNHKQWIC ERCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDTCTVRR
201: SQPSNHRLHE QQQHTTNATQ TASTAENNEN GDLSIGPILP GHPLQRRQSP PSEQQPSTLL YPFVTNGSIE LQLLPSRNCA DETSLSLSIG TMDQKTMSEV
301: EKKSYEKGET SLEREEARRE TKRQIEIAEL EFAEAKRIRQ HARAELHKAH LFREEASRRI SATMMQITCH NCKQHFQAPA ALVPPPPQTH CTDESTSLAV
401: SYMSSATTEG EKASDRASS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.