Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P18610_001 | Banana | nucleus | 73.16 | 73.55 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 67.89 | 69.73 |
| GSMUA_Achr10P... | Banana | nucleus | 68.95 | 68.41 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 71.32 | 63.92 |
| CDX96046 | Canola | nucleus | 38.42 | 62.66 |
| Solyc01g005060.2.1 | Tomato | nucleus | 51.84 | 58.11 |
| KRH41885 | Soybean | nucleus | 54.21 | 54.21 |
| KRH60588 | Soybean | nucleus | 55.53 | 52.75 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 58.95 | 52.71 |
| AT1G25250.3 | Thale cress | nucleus | 52.89 | 52.21 |
| CDY04204 | Canola | nucleus | 48.95 | 51.81 |
| PGSC0003DMT400079735 | Potato | nucleus, plastid | 59.21 | 51.49 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 51.84 | 51.44 |
| CDX84974 | Canola | nucleus | 51.58 | 51.17 |
| KRH58582 | Soybean | nucleus | 59.21 | 51.14 |
| Bra010981.1-P | Field mustard | nucleus | 50.79 | 51.06 |
| CDY36123 | Canola | nucleus | 50.79 | 51.06 |
| CDY51986 | Canola | nucleus | 50.79 | 51.06 |
| Bra024771.1-P | Field mustard | nucleus | 51.05 | 50.65 |
| CDY60366 | Canola | nucleus | 51.05 | 50.65 |
| VIT_17s0000g01870.t01 | Wine grape | nucleus | 60.53 | 50.55 |
| CDY04203 | Canola | plastid | 50.53 | 49.87 |
| Zm00001d005871_P002 | Maize | nucleus | 57.63 | 49.66 |
| KRH42485 | Soybean | nucleus | 58.95 | 49.56 |
| Solyc06g072360.2.1 | Tomato | nucleus | 50.79 | 49.23 |
| GSMUA_Achr10P... | Banana | nucleus | 51.58 | 49.12 |
| Solyc03g098070.2.1 | Tomato | nucleus | 46.84 | 48.9 |
| AT1G68130.1 | Thale cress | nucleus | 53.16 | 48.21 |
| Bra004050.1-P | Field mustard | nucleus | 52.11 | 47.94 |
| CDY07400 | Canola | nucleus | 52.11 | 47.94 |
| KRH38986 | Soybean | nucleus | 59.47 | 47.68 |
| Bra004283.1-P | Field mustard | nucleus | 51.58 | 47.57 |
| PGSC0003DMT400069306 | Potato | nucleus | 51.32 | 47.45 |
| Zm00001d020683_P001 | Maize | nucleus | 61.84 | 47.28 |
| CDY15800 | Canola | nucleus | 54.74 | 47.06 |
| Bra026624.1-P | Field mustard | nucleus | 54.21 | 47.03 |
| CDY09400 | Canola | nucleus | 54.21 | 47.03 |
| KRH48724 | Soybean | nucleus | 59.74 | 47.0 |
| TraesCS5B01G232200.1 | Wheat | nucleus | 60.79 | 46.95 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 60.53 | 46.84 |
| TraesCS5A01G233700.1 | Wheat | nucleus | 60.26 | 46.64 |
| EER96827 | Sorghum | nucleus | 61.05 | 46.49 |
| Bra017432.1-P | Field mustard | nucleus | 53.68 | 46.36 |
| Bra024841.1-P | Field mustard | nucleus | 53.95 | 46.17 |
| CDY17620 | Canola | nucleus | 53.95 | 46.17 |
| AT2G01940.3 | Thale cress | nucleus | 53.95 | 45.96 |
| CDY60095 | Canola | nucleus | 53.42 | 45.93 |
| CDY04102 | Canola | nucleus | 53.95 | 45.66 |
| CDY63960 | Canola | nucleus | 53.95 | 45.45 |
| Zm00001d031759_P001 | Maize | nucleus | 61.32 | 44.98 |
| EES13982 | Sorghum | nucleus | 61.32 | 43.47 |
| Os08t0467100-01 | Rice | nucleus | 60.79 | 43.34 |
| Solyc05g054030.2.1 | Tomato | nucleus | 42.37 | 42.26 |
| GSMUA_Achr2P08460_001 | Banana | nucleus | 28.68 | 34.6 |
| GSMUA_Achr3P25410_001 | Banana | nucleus | 28.42 | 33.13 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 31.05 | 33.05 |
| GSMUA_Achr2P16690_001 | Banana | nucleus | 31.32 | 32.34 |
| GSMUA_Achr7P22720_001 | Banana | mitochondrion | 23.42 | 31.67 |
| GSMUA_Achr7P13540_001 | Banana | nucleus | 30.26 | 31.51 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 30.0 | 31.32 |
| GSMUA_Achr5P22140_001 | Banana | nucleus | 30.0 | 29.92 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 28.42 | 29.43 |
| GSMUA_Achr2P08910_001 | Banana | nucleus | 29.47 | 29.09 |
| GSMUA_Achr10P... | Banana | nucleus | 28.42 | 28.65 |
| GSMUA_Achr7P09150_001 | Banana | nucleus | 30.26 | 28.05 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 30.53 | 27.23 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 25.26 | 27.12 |
| GSMUA_Achr10P... | Banana | nucleus | 31.58 | 26.73 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 31.84 | 25.91 |
| GSMUA_Achr11P... | Banana | nucleus | 28.16 | 25.85 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 26.84 | 25.63 |
| GSMUA_Achr8P10040_001 | Banana | nucleus | 30.0 | 25.5 |
| GSMUA_Achr5P06450_001 | Banana | nucleus | 30.79 | 24.58 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 30.53 | 23.87 |
| GSMUA_Achr10P... | Banana | nucleus | 29.74 | 23.59 |
| GSMUA_Achr7P24170_001 | Banana | nucleus | 31.05 | 23.51 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 32.11 | 22.59 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 25.79 | 22.58 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 28.95 | 22.49 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 31.84 | 22.28 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 28.68 | 22.24 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 27.37 | 21.99 |
| GSMUA_Achr11P... | Banana | nucleus | 28.95 | 21.53 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 32.89 | 21.51 |
| GSMUA_Achr11P... | Banana | nucleus | 30.0 | 21.39 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 32.63 | 20.95 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 27.11 | 20.6 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 29.47 | 20.48 |
| GSMUA_Achr11P... | Banana | nucleus | 27.89 | 18.73 |
| GSMUA_AchrUn_... | Banana | nucleus | 31.58 | 13.5 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| EnsemblPlantsGene:GSMUA_Achr5G23130_001 | EnsemblPlants:GSMUA_Achr5P23130_001 | EnsemblPlants:GSMUA_Achr5T23130_001 | InterPro:IPR013087 | UniProt:M0T0Y8 | ScanProsite:PS00028 |
| PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF43 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI000296E6D4 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
ZOS9-14 - C2H2 zinc finger protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G23130_001]
Coordinates
chr5:-:24956151..24957959
Molecular Weight (calculated)
42227.1 Da
IEP (calculated)
9.388
GRAVY (calculated)
-0.726
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MSVLSQSRIT TYGTMLSSPP PPAPPPPGGS NGSSSKKKRR PAGTPDPDAE VVALSPRTLL ESDRYVCEIC QQGFQRDQNL QMHRRRHKVP WKLLKRDAAA
101: SEVRKRVFVC PEMTCLHHDP RHALGDLVGI KKHFRRKHSS HRQWACAKCS KAYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD TCTAGQARAE
201: LQMNQAPACV SRMASNTTPS SWSGLGMPSP AAALQLLPTS NNQHTTRPSS ALSSPASEEA EAMEHLKLAM AEKALADESR QQARRQLELA EHEIERAKRI
301: RQQAQLELNR AHAIREHAVK QINSAMLQIT CHACKQQFQQ AKPAMASEAN SFAISYMSSA VTEGDEENDE HNHQHKIPKL
101: SEVRKRVFVC PEMTCLHHDP RHALGDLVGI KKHFRRKHSS HRQWACAKCS KAYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD TCTAGQARAE
201: LQMNQAPACV SRMASNTTPS SWSGLGMPSP AAALQLLPTS NNQHTTRPSS ALSSPASEEA EAMEHLKLAM AEKALADESR QQARRQLELA EHEIERAKRI
301: RQQAQLELNR AHAIREHAVK QINSAMLQIT CHACKQQFQQ AKPAMASEAN SFAISYMSSA VTEGDEENDE HNHQHKIPKL
001: MIHYEQNNNL QNLPSSSSND LLLGINGADA THKRKRRPAG TPDPDAEVVS LSPRTLLESD RYVCEICNQG FQRDQNLQMH RRRHKVPWKL LKRDKKDEEV
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
Arabidopsis Description
AtIDD16IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.