Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY17620 | Canola | nucleus | 96.38 | 95.95 |
| CDY15800 | Canola | nucleus | 89.37 | 89.37 |
| CDY09400 | Canola | nucleus | 85.52 | 86.3 |
| CDY63960 | Canola | nucleus | 86.88 | 85.14 |
| AT2G01940.3 | Thale cress | nucleus | 85.75 | 84.98 |
| CDY04102 | Canola | nucleus | 86.2 | 84.86 |
| CDX96046 | Canola | nucleus | 37.56 | 71.24 |
| CDY04118 | Canola | nucleus | 17.19 | 63.87 |
| CDY09390 | Canola | nucleus | 17.19 | 63.87 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 59.05 | 61.41 |
| CDY14910 | Canola | nucleus | 17.65 | 58.65 |
| CDY04204 | Canola | nucleus | 46.83 | 57.66 |
| KRH58582 | Soybean | nucleus | 57.01 | 57.27 |
| CDY60366 | Canola | nucleus | 49.32 | 56.92 |
| CDX84974 | Canola | nucleus | 49.09 | 56.66 |
| KRH42485 | Soybean | nucleus | 57.47 | 56.19 |
| CDY04203 | Canola | plastid | 48.87 | 56.1 |
| CDY07400 | Canola | nucleus | 52.04 | 55.69 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 47.51 | 55.56 |
| CDY36123 | Canola | nucleus | 46.83 | 54.76 |
| CDY51986 | Canola | nucleus | 46.61 | 54.5 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 45.93 | 53.42 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 44.34 | 52.97 |
| GSMUA_Achr10P... | Banana | nucleus | 44.57 | 51.44 |
| CDY37489 | Canola | nucleus | 21.27 | 51.09 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 48.87 | 50.94 |
| CDY72283 | Canola | nucleus | 21.49 | 50.26 |
| GSMUA_Achr10P... | Banana | nucleus | 42.76 | 47.37 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 40.95 | 47.26 |
| CDY53540 | Canola | nucleus | 20.59 | 46.91 |
| Solyc05g054030.2.1 | Tomato | nucleus | 40.27 | 46.72 |
| CDY04117 | Canola | nucleus | 21.72 | 44.86 |
| Zm00001d005871_P002 | Maize | nucleus | 44.34 | 44.44 |
| TraesCS4B01G230800.1 | Wheat | nucleus, plastid | 40.5 | 44.2 |
| TraesCS4D01G232000.1 | Wheat | nucleus, plastid | 40.95 | 43.72 |
| TraesCS4A01G074700.1 | Wheat | nucleus, plastid | 40.95 | 43.61 |
| HORVU4Hr1G064740.2 | Barley | nucleus, plastid | 40.72 | 42.35 |
| TraesCS5B01G232200.1 | Wheat | nucleus | 46.83 | 42.07 |
| Os03t0237250-01 | Rice | plastid | 41.63 | 42.01 |
| TraesCS5A01G233700.1 | Wheat | nucleus | 46.61 | 41.96 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 46.61 | 41.96 |
| Zm00001d020683_P001 | Maize | nucleus | 46.15 | 41.05 |
| EER96827 | Sorghum | nucleus | 45.93 | 40.68 |
| CDY70142 | Canola | nucleus | 16.74 | 40.66 |
| Zm00001d031759_P001 | Maize | nucleus | 47.29 | 40.35 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 40.95 | 40.04 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 40.27 | 39.73 |
| Os08t0467100-01 | Rice | nucleus | 47.29 | 39.21 |
| KXG39813 | Sorghum | nucleus, plastid | 40.5 | 39.0 |
| EES13982 | Sorghum | nucleus | 47.06 | 38.81 |
| CDX97281 | Canola | nucleus, plastid | 25.57 | 29.35 |
| CDY24490 | Canola | nucleus | 28.28 | 28.74 |
| CDX77936 | Canola | nucleus | 27.83 | 28.21 |
| CDX91304 | Canola | nucleus, plastid | 25.57 | 27.97 |
| CDX86010 | Canola | nucleus | 26.47 | 26.12 |
| CDY53836 | Canola | nucleus | 26.47 | 25.83 |
| CDX75732 | Canola | nucleus | 25.57 | 25.51 |
| CDY59418 | Canola | nucleus | 23.76 | 25.42 |
| CDY67009 | Canola | nucleus | 27.38 | 25.42 |
| CDY22307 | Canola | nucleus | 26.02 | 24.78 |
| CDX94759 | Canola | nucleus | 26.02 | 24.78 |
| CDX82515 | Canola | nucleus | 24.43 | 24.49 |
| CDX81372 | Canola | nucleus | 26.92 | 24.34 |
| CDY57128 | Canola | nucleus | 26.92 | 24.19 |
| CDX89862 | Canola | nucleus | 26.24 | 24.17 |
| CDY45271 | Canola | nucleus | 22.62 | 24.04 |
| CDY18188 | Canola | nucleus | 26.02 | 24.01 |
| CDY51742 | Canola | nucleus | 25.57 | 23.35 |
| CDY45270 | Canola | nucleus | 23.76 | 23.33 |
| CDX97521 | Canola | nucleus | 25.57 | 23.3 |
| CDY55238 | Canola | nucleus | 25.57 | 23.25 |
| CDY15814 | Canola | nucleus | 24.66 | 23.04 |
| CDX81653 | Canola | nucleus | 24.21 | 22.91 |
| CDY32514 | Canola | nucleus | 25.34 | 22.86 |
| CDY44344 | Canola | nucleus | 25.79 | 22.8 |
| CDY17440 | Canola | nucleus | 24.43 | 22.59 |
| CDX80854 | Canola | nucleus | 25.57 | 22.38 |
| CDY10404 | Canola | nucleus | 25.57 | 22.29 |
| CDY11241 | Canola | nucleus | 25.34 | 22.27 |
| CDY17614 | Canola | nucleus, plastid | 25.57 | 22.03 |
| CDY03080 | Canola | nucleus, plastid | 25.57 | 21.9 |
| CDX70328 | Canola | nucleus | 25.34 | 21.79 |
| CDY03081 | Canola | nucleus | 25.79 | 21.76 |
| CDY17615 | Canola | nucleus | 25.79 | 21.63 |
| CDY09391 | Canola | nucleus | 26.47 | 20.63 |
| CDY15811 | Canola | nucleus | 26.47 | 20.6 |
| CDY12268 | Canola | nucleus | 18.33 | 18.16 |
| CDY68983 | Canola | nucleus | 15.16 | 17.14 |
| CDY70938 | Canola | cytosol, nucleus | 9.28 | 15.02 |
| CDY67587 | Canola | cytosol, nucleus | 6.33 | 12.44 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078J903 | UniProt:A0A078J903 | EnsemblPlants:CDY60095 | ProteinID:CDY60095 |
| ProteinID:CDY60095.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0009605 | GO:GO:0009606 | GO:GO:0009628 | GO:GO:0009630 | EnsemblPlantsGene:GSBRNA2T00028157001 | InterPro:IPR013087 |
| ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR34946 | PANTHER:PTHR34946:SF6 | SMART:SM00355 | SUPFAM:SSF57667 |
| UniParc:UPI0004EDF4F4 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
BnaC07g48900DBnaC07g48900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J903]
Coordinates
chrLK033841:+:26142..28712
Molecular Weight (calculated)
49678.7 Da
IEP (calculated)
9.073
GRAVY (calculated)
-0.775
Length
442 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTDQGAVVM LDDAASKKNT TNTRCVVFSS SDILLPSSEN GVTTTKTSTQ KRKRRPAGTP DPDAEVVSLS PRTLLESDRY ICEICNQGFQ RDQNLQMHRR
101: RHKVPWKLLR RDNNIEVKKR VYVCPEPTCL HHDPCHALGD LVGIKKHFRR KHSNHKQWVC EKCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI
201: EHQDNCSVRN VHHEPPPPPQ TAAIITACSS RTASTASTPS SETNYGGAVT AATPLPLEGR PIHIRSSSLT PLVLNNSSNL NLELQLLPLT PNLNPNQEYQ
301: QHKVKEPSLH HHHHNHDTTN LNLSIAPSSS SYHHYNNFDR IKELMASEQI MKEKAYAEEA KREAKIQREI AENEFANAKK IRQQAQTELK RAKLLKEQSM
401: KKISSTIMQV TCQTCKGQFQ ATEETSLVVS YMSSANTDGE GS
101: RHKVPWKLLR RDNNIEVKKR VYVCPEPTCL HHDPCHALGD LVGIKKHFRR KHSNHKQWVC EKCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI
201: EHQDNCSVRN VHHEPPPPPQ TAAIITACSS RTASTASTPS SETNYGGAVT AATPLPLEGR PIHIRSSSLT PLVLNNSSNL NLELQLLPLT PNLNPNQEYQ
301: QHKVKEPSLH HHHHNHDTTN LNLSIAPSSS SYHHYNNFDR IKELMASEQI MKEKAYAEEA KREAKIQREI AENEFANAKK IRQQAQTELK RAKLLKEQSM
401: KKISSTIMQV TCQTCKGQFQ ATEETSLVVS YMSSANTDGE GS
001: MIHYEQNNNL QNLPSSSSND LLLGINGADA THKRKRRPAG TPDPDAEVVS LSPRTLLESD RYVCEICNQG FQRDQNLQMH RRRHKVPWKL LKRDKKDEEV
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
Arabidopsis Description
AtIDD16IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.