Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033724.1-P | Field mustard | nucleus | 99.14 | 99.14 |
| CDX94759 | Canola | nucleus | 97.41 | 97.41 |
| CDY14910 | Canola | nucleus | 25.86 | 90.23 |
| AT5G44160.1 | Thale cress | nucleus | 85.78 | 85.41 |
| CDY09390 | Canola | nucleus | 21.12 | 82.35 |
| CDY04118 | Canola | nucleus | 21.12 | 82.35 |
| CDY72283 | Canola | nucleus | 31.68 | 77.78 |
| CDY37489 | Canola | nucleus | 26.94 | 67.93 |
| CDY53540 | Canola | nucleus | 27.37 | 65.46 |
| CDY18188 | Canola | nucleus | 63.79 | 61.8 |
| CDY04117 | Canola | nucleus | 28.45 | 61.68 |
| CDX89862 | Canola | nucleus | 63.79 | 61.67 |
| CDY32514 | Canola | nucleus | 65.09 | 61.63 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 43.32 | 56.3 |
| CDY70142 | Canola | nucleus | 21.55 | 54.95 |
| Zm00001d039254_P001 | Maize | nucleus | 41.38 | 54.24 |
| Os01t0242200-01 | Rice | nucleus | 47.63 | 53.25 |
| PGSC0003DMT400024272 | Potato | nucleus | 54.31 | 50.91 |
| Solyc07g053570.2.1 | Tomato | nucleus | 53.88 | 49.8 |
| GSMUA_Achr10P... | Banana | nucleus | 39.87 | 49.07 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 37.5 | 47.41 |
| TraesCS3B01G195900.1 | Wheat | nucleus | 49.35 | 46.64 |
| TraesCS3D01G171300.1 | Wheat | nucleus | 48.92 | 46.23 |
| TraesCS3A01G170700.1 | Wheat | nucleus | 48.71 | 46.22 |
| EES02157 | Sorghum | nucleus | 47.84 | 46.15 |
| VIT_12s0028g03030.t01 | Wine grape | nucleus | 42.46 | 46.14 |
| CDX96046 | Canola | nucleus | 22.84 | 45.49 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 33.19 | 43.5 |
| CDX97281 | Canola | nucleus, plastid | 35.13 | 42.34 |
| KRH22332 | Soybean | nucleus | 43.1 | 42.19 |
| CDY24490 | Canola | nucleus | 38.79 | 41.38 |
| CDX77936 | Canola | nucleus | 38.79 | 41.28 |
| Zm00001d009030_P002 | Maize | nucleus | 39.66 | 41.16 |
| KRH26995 | Soybean | nucleus | 42.46 | 41.04 |
| CDY59418 | Canola | nucleus | 35.78 | 40.19 |
| CDX91304 | Canola | nucleus, plastid | 34.91 | 40.1 |
| CDX75732 | Canola | nucleus | 38.15 | 39.95 |
| CDX82515 | Canola | nucleus | 36.85 | 38.78 |
| CDX86010 | Canola | nucleus | 37.07 | 38.39 |
| CDY17615 | Canola | nucleus | 43.53 | 38.33 |
| CDY53836 | Canola | nucleus | 37.28 | 38.19 |
| CDY03081 | Canola | nucleus | 43.1 | 38.17 |
| CDX81653 | Canola | nucleus | 38.15 | 37.9 |
| CDY17440 | Canola | nucleus | 39.01 | 37.87 |
| CDY67009 | Canola | nucleus | 38.79 | 37.82 |
| CDX97521 | Canola | nucleus | 39.22 | 37.53 |
| CDY51742 | Canola | nucleus | 39.01 | 37.4 |
| CDY55238 | Canola | nucleus | 38.79 | 37.04 |
| CDY17614 | Canola | nucleus, plastid | 40.95 | 37.04 |
| CDY15814 | Canola | nucleus | 37.72 | 37.0 |
| CDY57128 | Canola | nucleus | 39.22 | 36.99 |
| CDX81372 | Canola | nucleus | 38.79 | 36.81 |
| CDY09391 | Canola | nucleus | 44.83 | 36.68 |
| CDY15811 | Canola | nucleus | 44.61 | 36.44 |
| CDY03080 | Canola | nucleus, plastid | 40.52 | 36.43 |
| CDY44344 | Canola | nucleus | 39.01 | 36.2 |
| CDY11241 | Canola | nucleus | 38.79 | 35.79 |
| CDX80854 | Canola | nucleus | 38.58 | 35.45 |
| CDY10404 | Canola | nucleus | 38.58 | 35.31 |
| CDY45271 | Canola | nucleus | 31.25 | 34.86 |
| CDX70328 | Canola | nucleus | 38.58 | 34.82 |
| CDY45270 | Canola | nucleus | 32.76 | 33.78 |
| CDY04204 | Canola | nucleus | 23.49 | 30.36 |
| CDX84974 | Canola | nucleus | 25.0 | 30.29 |
| CDY51986 | Canola | nucleus | 24.57 | 30.16 |
| CDY36123 | Canola | nucleus | 24.57 | 30.16 |
| CDY60366 | Canola | nucleus | 24.78 | 30.03 |
| CDY04203 | Canola | plastid | 24.35 | 29.35 |
| CDY67587 | Canola | cytosol, nucleus | 13.79 | 28.44 |
| CDY07400 | Canola | nucleus | 25.0 | 28.09 |
| CDY09400 | Canola | nucleus | 25.22 | 26.71 |
| CDY70938 | Canola | cytosol, nucleus | 15.52 | 26.37 |
| CDY17620 | Canola | nucleus | 25.22 | 26.35 |
| Os07t0581366-00 | Rice | cytosol, nucleus | 35.99 | 26.34 |
| CDY04102 | Canola | nucleus | 25.43 | 26.28 |
| CDY15800 | Canola | nucleus | 25.0 | 26.24 |
| CDY63960 | Canola | nucleus | 25.43 | 26.16 |
| CDY60095 | Canola | nucleus | 24.78 | 26.02 |
| CDY12268 | Canola | nucleus | 24.78 | 25.78 |
| Zm00001d006682_P001 | Maize | nucleus | 38.36 | 23.99 |
| CDY68983 | Canola | nucleus | 19.83 | 23.53 |
| EER97442 | Sorghum | nucleus | 38.15 | 22.58 |
| TraesCS2B01G218900.1 | Wheat | nucleus | 38.15 | 22.07 |
| Zm00001d021932_P001 | Maize | nucleus | 38.36 | 21.84 |
| TraesCS2A01G188400.2 | Wheat | nucleus | 38.15 | 21.33 |
| TraesCS2D01G199300.3 | Wheat | nucleus | 37.93 | 20.83 |
| HORVU2Hr1G036710.3 | Barley | nucleus | 32.54 | 17.4 |
Protein Annotations
| EnsemblPlants:CDY22307 | EnsemblPlantsGene:GSBRNA2T00018774001 | Gene3D:3.30.160.60 | GO:A0A078GB46 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF26 |
| PFscan:PS50157 | ProteinID:CDY22307 | ProteinID:CDY22307.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EF2082 | UniProt:A0A078GB46 | MapMan:15.5.15 | : | : |
Description
BnaA06g36290DBnaA06g36290D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GB46]
Coordinates
chrLK032130:-:44267..46580
Molecular Weight (calculated)
50608.1 Da
IEP (calculated)
8.378
GRAVY (calculated)
-0.609
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGEVLKTVS SGSAAFAPSS STLDHDESLI NPPVVKKKRN LPGNPDPEAE VIALSPKTLM ATNRFLCEVC GKGFQRDQNL QLHRRGHNLP WKLKQRTSKE
101: VRKRVYVCPE NTCVHHDPAR ALGDLTGIKK HFCRKHGEKK WTCEKCAKRY AVHSDYKAHS KTCGTREYRC DCGTIFSRRD SFITHRAFCD ALAEETAKIN
201: AASHLNGLSA AGTVGMNLNY QYLMGTLNPP LQPFVPQPPT NQNHHHHFLP PPPSSSSSLS LWMGQDIAPT SQTQPQDYEW VFANAKAASG CINNNNHNDH
301: ITQTANASST TTATLSVPSL FSSDQTQSPN ANVNMSATAL LQKAAEIGAN STTATSTNPS AFLKSFPLKS SDQTTTSYDD GEKFFALFGS NNNIGVVSNS
401: HDQETENVRN DVTVASAMDE LQNYPWKRRK VDGGGEGGGG GQTRDFLGVG VQTLCQPSSI NGWI
101: VRKRVYVCPE NTCVHHDPAR ALGDLTGIKK HFCRKHGEKK WTCEKCAKRY AVHSDYKAHS KTCGTREYRC DCGTIFSRRD SFITHRAFCD ALAEETAKIN
201: AASHLNGLSA AGTVGMNLNY QYLMGTLNPP LQPFVPQPPT NQNHHHHFLP PPPSSSSSLS LWMGQDIAPT SQTQPQDYEW VFANAKAASG CINNNNHNDH
301: ITQTANASST TTATLSVPSL FSSDQTQSPN ANVNMSATAL LQKAAEIGAN STTATSTNPS AFLKSFPLKS SDQTTTSYDD GEKFFALFGS NNNIGVVSNS
401: HDQETENVRN DVTVASAMDE LQNYPWKRRK VDGGGEGGGG GQTRDFLGVG VQTLCQPSSI NGWI
001: MTSEVLQTIS SGSGFAQPQS SSTLDHDESL INPPLVKKKR NLPGNPDPEA EVIALSPTTL MATNRFLCEV CGKGFQRDQN LQLHRRGHNL PWKLKQRTSK
101: EVRKRVYVCP EKTCVHHHSS RALGDLTGIK KHFCRKHGEK KWTCEKCAKR YAVQSDWKAH SKTCGTREYR CDCGTIFSRR DSFITHRAFC DALAEETAKI
201: NAVSHLNGLA AAGAPGSVNL NYQYLMGTFI PPLQPFVPQP QTNPNHHHQH FQPPTSSSLS LWMGQDIAPP QPQPDYDWVF GNAKAASACI DNNNTHDEQI
301: TQNANASLTT TTTLSAPSLF SSDQPQNANA NSNVNMSATA LLQKAAEIGA TSTTTAATND PSTFLQSFPL KSTDQTTSYD SGEKFFALFG SNNNIGLMSR
401: SHDHQEIENA RNDVTVASAL DELQNYPWKR RRVDGGGEVG GGGQTRDFLG VGVQTLCHPS SINGWI
101: EVRKRVYVCP EKTCVHHHSS RALGDLTGIK KHFCRKHGEK KWTCEKCAKR YAVQSDWKAH SKTCGTREYR CDCGTIFSRR DSFITHRAFC DALAEETAKI
201: NAVSHLNGLA AAGAPGSVNL NYQYLMGTFI PPLQPFVPQP QTNPNHHHQH FQPPTSSSLS LWMGQDIAPP QPQPDYDWVF GNAKAASACI DNNNTHDEQI
301: TQNANASLTT TTTLSAPSLF SSDQPQNANA NSNVNMSATA LLQKAAEIGA TSTTTAATND PSTFLQSFPL KSTDQTTSYD SGEKFFALFG SNNNIGLMSR
401: SHDHQEIENA RNDVTVASAL DELQNYPWKR RRVDGGGEVG GGGQTRDFLG VGVQTLCHPS SINGWI
Arabidopsis Description
NUCZinc finger protein NUTCRACKER [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.