Factsheet for Bra033724.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001446.1-P
Bra014251.1-P
Bra018848.1-P
Bra034764.1-P
Bra038707.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G44160.1	Bra014251.1-P	AT1G50420.1	21798944
AT5G44160.1	Bra018848.1-P	AT1G50420.1	21798944
AT5G44160.1	Bra001446.1-P	AT3G12280.1	22921914
AT5G44160.1	Bra034764.1-P	AT3G12280.1	22921914
AT5G44160.1	Bra038707.1-P	AT3G12280.1	22921914

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22307	Canola	nucleus	99.14	99.14
CDX94759	Canola	nucleus	97.41	97.41
AT5G44160.1	Thale cress	nucleus	85.78	85.41
Bra036013.1-P	Field mustard	nucleus	28.23	82.91
Bra015271.1-P	Field mustard	nucleus	64.66	62.24
Bra032541.1-P	Field mustard	nucleus	65.3	61.84
GSMUA_Achr7P14780_001	Banana	nucleus	43.32	56.3
Zm00001d039254_P001	Maize	nucleus	41.59	54.52
Os01t0242200-01	Rice	nucleus	47.63	53.25
PGSC0003DMT400024272	Potato	nucleus	54.53	51.11
Solyc07g053570.2.1	Tomato	nucleus	54.09	50.0
GSMUA_Achr10P...	Banana	nucleus	40.09	49.34
GSMUA_Achr9P06650_001	Banana	nucleus	37.93	47.96
TraesCS3B01G195900.1	Wheat	nucleus	49.35	46.64
VIT_12s0028g03030.t01	Wine grape	nucleus	42.67	46.37
EES02157	Sorghum	nucleus	48.06	46.36
TraesCS3D01G171300.1	Wheat	nucleus	48.92	46.23
TraesCS3A01G170700.1	Wheat	nucleus	48.71	46.22
GSMUA_Achr6P27030_001	Banana	nucleus	33.41	43.79
KRH22332	Soybean	nucleus	43.32	42.41
Zm00001d009030_P002	Maize	nucleus	39.87	41.39
Bra036098.1-P	Field mustard	nucleus, plastid	38.79	41.28
KRH26995	Soybean	nucleus	42.67	41.25
Bra018535.1-P	Field mustard	plastid	35.56	40.84
Bra033840.1-P	Field mustard	nucleus	38.79	39.74
Bra030886.1-P	Field mustard	nucleus	37.07	39.36
Bra026819.1-P	Field mustard	nucleus	37.93	37.69
Bra024834.1-P	Field mustard	nucleus, plastid	44.18	37.14
Bra026616.1-P	Field mustard	nucleus	40.73	36.99
Bra024833.1-P	Field mustard	plastid	40.52	36.65
Bra037151.1-P	Field mustard	nucleus	38.79	36.59
Bra005741.1-P	Field mustard	nucleus	39.44	36.31
Bra027394.1-P	Field mustard	nucleus	39.44	36.24
Bra040974.1-P	Field mustard	nucleus, plastid	45.26	35.9
Bra021510.1-P	Field mustard	nucleus	39.22	35.69
Bra026617.1-P	Field mustard	nucleus	45.26	35.59
Bra009549.1-P	Field mustard	nucleus	39.01	35.08
Bra001523.1-P	Field mustard	nucleus	38.15	34.57
Bra026204.1-P	Field mustard	nucleus, plastid	33.19	34.22
Bra026203.1-P	Field mustard	nucleus, plastid	32.11	32.11
Bra010981.1-P	Field mustard	nucleus	24.57	30.16
Bra024771.1-P	Field mustard	nucleus	24.78	30.03
Bra004283.1-P	Field mustard	nucleus	25.65	28.88
Bra004050.1-P	Field mustard	nucleus	25.0	28.09
Bra023223.1-P	Field mustard	plastid	28.45	27.5
Bra017432.1-P	Field mustard	nucleus	25.43	26.82
Bra026624.1-P	Field mustard	nucleus	25.22	26.71
Bra024841.1-P	Field mustard	nucleus	25.22	26.35
Os07t0581366-00	Rice	cytosol, nucleus	35.99	26.34
Zm00001d006682_P001	Maize	nucleus	38.15	23.85
EER97442	Sorghum	nucleus	38.15	22.58
TraesCS2B01G218900.1	Wheat	nucleus	38.15	22.07
Zm00001d021932_P001	Maize	nucleus	38.36	21.84
TraesCS2A01G188400.2	Wheat	nucleus	38.15	21.33
TraesCS2D01G199300.3	Wheat	nucleus	37.93	20.83
Bra038293.1-P	Field mustard	nucleus	36.85	19.3
HORVU2Hr1G036710.3	Barley	nucleus	32.54	17.4

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	EnsemblPlantsGene:Bra033724	EnsemblPlants:Bra033724.1	EnsemblPlants:Bra033724.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0003676	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0008356	GO:GO:0009058	GO:GO:0009628	GO:GO:0009791	GO:GO:0009987	GO:GO:0010150
GO:GO:0045893	GO:GO:0048510	GO:GO:0048573	InterPro:IPR013087	UniProt:M4EY34	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF26	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI000253F6AF
InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:	:

Description

AT5G44160 (E=2e-195) NUC | NUC (nutcracker); nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA06:-:25416271..25418581

Molecular Weight (calculated)

50647.2 Da

IEP (calculated)

8.594

GRAVY (calculated)

-0.615

Length

464 amino acids

Sequence
(BLAST)

001: MTGEVLKTVS SGSAAFAPSS STLDHDESLI NPPVVKKKRN LPGNPDPEAE VIALSPKTLM ATNRFLCEVC GKGFQRDQNL QLHRRGHNLP WKLKQRTSKE
101: VRKRVYVCPE KTCVHHDPAR ALGDLTGIKK HFCRKHGEKK WTCEKCAKRY AVHSDYKAHS KTCGTREYRC DCGTIFSRRD SFITHRAFCD ALAEETAKIN
201: AASHLNGLSS AGTVGMNLNY QYLMGTLNPP LQPFVPKPPT NQNHHHHFLP PPPSSSSSLS LWMGQDIAPT SQTQPQDYEW VFANAKAASG CINNNNHNDH
301: ITQTANASST TTATLSVPSL FSSDQTQSPN ANVNMSATAL LQKAAEIGAN STTATSTNPS AFLKSFPLKS SDQTTTSYDD GEKFFALFGS NNNIGVVSNS
401: HDQETENVRN DVTVASAMDE LQNYPWKRRK VDGGGEGGGG GQTRDFLGVG VQTLCHPSSI NGWI

Best Arabidopsis Sequence Match ( AT5G44160.1 )
(BLAST)

001: MTSEVLQTIS SGSGFAQPQS SSTLDHDESL INPPLVKKKR NLPGNPDPEA EVIALSPTTL MATNRFLCEV CGKGFQRDQN LQLHRRGHNL PWKLKQRTSK
101: EVRKRVYVCP EKTCVHHHSS RALGDLTGIK KHFCRKHGEK KWTCEKCAKR YAVQSDWKAH SKTCGTREYR CDCGTIFSRR DSFITHRAFC DALAEETAKI
201: NAVSHLNGLA AAGAPGSVNL NYQYLMGTFI PPLQPFVPQP QTNPNHHHQH FQPPTSSSLS LWMGQDIAPP QPQPDYDWVF GNAKAASACI DNNNTHDEQI
301: TQNANASLTT TTTLSAPSLF SSDQPQNANA NSNVNMSATA LLQKAAEIGA TSTTTAATND PSTFLQSFPL KSTDQTTSYD SGEKFFALFG SNNNIGLMSR
401: SHDHQEIENA RNDVTVASAL DELQNYPWKR RRVDGGGEVG GGGQTRDFLG VGVQTLCHPS SINGWI

Arabidopsis Description

NUCZinc finger protein NUTCRACKER [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.