Factsheet for Bra026617.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09391	Canola	nucleus	95.59	99.47
Bra040974.1-P	Field mustard	nucleus, plastid	86.27	87.01
Bra024834.1-P	Field mustard	nucleus, plastid	80.34	85.87
AT2G02070.2	Thale cress	nucleus	86.95	85.22
Bra036013.1-P	Field mustard	nucleus	18.14	67.72
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	31.86	51.65
KRG89168	Soybean	nucleus, plastid	29.83	50.57
Bra026616.1-P	Field mustard	nucleus	42.71	49.32
Bra024833.1-P	Field mustard	plastid	42.54	48.93
Bra026819.1-P	Field mustard	nucleus	38.47	48.61
GSMUA_Achr3P13990_001	Banana	nucleus	34.41	47.65
GSMUA_Achr1P17940_001	Banana	nucleus	36.27	45.82
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	30.68	45.48
Bra033724.1-P	Field mustard	nucleus	35.59	45.26
Bra015271.1-P	Field mustard	nucleus	36.95	45.23
Bra032541.1-P	Field mustard	nucleus	36.1	43.47
GSMUA_Achr1P07110_001	Banana	nucleus	35.42	43.0
GSMUA_Achr10P...	Banana	nucleus	34.58	42.59
Bra036098.1-P	Field mustard	nucleus, plastid	31.19	42.2
GSMUA_Achr9P23870_001	Banana	nucleus	31.02	42.17
Bra030886.1-P	Field mustard	nucleus	31.19	42.11
Bra018535.1-P	Field mustard	plastid	28.64	41.83
KRG90705	Soybean	nucleus	39.49	41.09
KRH49489	Soybean	nucleus, plastid	37.12	41.09
KRH36039	Soybean	nucleus	39.66	40.98
KRH49485	Soybean	nucleus	37.63	40.88
PGSC0003DMT400075837	Potato	nucleus	35.76	40.73
Bra033840.1-P	Field mustard	nucleus	31.19	40.62
KRH34792	Soybean	nucleus	38.14	40.54
VIT_01s0010g02100.t01	Wine grape	nucleus	39.15	40.38
GSMUA_Achr4P04310_001	Banana	nucleus	32.37	40.38
Os09t0555700-02	Rice	nucleus	36.61	40.37
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	33.39	40.29
KRG89167	Soybean	nucleus, plastid	37.12	39.89
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	33.05	39.8
Solyc04g008500.2.1	Tomato	nucleus	34.75	39.65
KRG91985	Soybean	nucleus	37.29	39.29
Bra021510.1-P	Field mustard	nucleus	33.73	39.02
Bra027394.1-P	Field mustard	nucleus	33.05	38.61
Bra009549.1-P	Field mustard	nucleus	33.73	38.57
TraesCS5A01G356100.1	Wheat	nucleus, plastid	35.59	38.53
Bra005741.1-P	Field mustard	nucleus	32.88	38.49
TraesCS5B01G358600.1	Wheat	nucleus, plastid	35.42	38.28
TraesCS5D01G364900.1	Wheat	nucleus, plastid	35.42	38.21
Bra037151.1-P	Field mustard	nucleus	31.53	37.8
Bra026204.1-P	Field mustard	nucleus, plastid	28.81	37.78
Os08t0554400-02	Rice	nucleus	35.08	37.77
KXG25416	Sorghum	nucleus	35.25	37.61
GSMUA_Achr1P02080_001	Banana	nucleus	34.75	37.48
EES11271	Sorghum	nucleus	37.97	37.4
GSMUA_Achr11P...	Banana	nucleus	33.56	37.15
Zm00001d017560_P001	Maize	nucleus	36.61	37.11
GSMUA_Achr4P05240_001	Banana	nucleus	31.36	37.0
Zm00001d021403_P001	Maize	nucleus	30.34	36.98
TraesCS2B01G421100.1	Wheat	nucleus	38.31	36.93
Bra001523.1-P	Field mustard	nucleus	31.86	36.72
KXG31026	Sorghum	nucleus	36.95	36.64
GSMUA_Achr11P...	Banana	nucleus	31.53	36.4
TraesCS6B01G271000.1	Wheat	nucleus	35.42	36.28
Zm00001d026113_P006	Maize	nucleus	36.78	36.23
OQU89911	Sorghum	nucleus, plastid	32.71	36.21
TraesCS6D01G235800.1	Wheat	nucleus	35.42	36.16
Os04t0566400-02	Rice	nucleus	37.46	36.05
TraesCS6A01G254500.1	Wheat	nucleus	35.25	35.99
Bra026203.1-P	Field mustard	nucleus, plastid	27.8	35.34
Zm00001d002654_P003	Maize	nucleus	37.8	35.23
Os02t0672100-01	Rice	nucleus	36.61	35.12
Bra023223.1-P	Field mustard	plastid	28.47	35.0
Zm00001d031992_P001	Maize	nucleus	35.25	34.38
TraesCS2D01G400300.2	Wheat	nucleus	38.31	34.14
TraesCS2A01G403200.2	Wheat	nucleus	38.31	34.09
GSMUA_Achr11P...	Banana	nucleus	31.19	32.51
KXG36163	Sorghum	nucleus	29.32	29.73
Bra010981.1-P	Field mustard	nucleus	18.64	29.1
Bra024771.1-P	Field mustard	nucleus	18.64	28.72
Bra004283.1-P	Field mustard	nucleus	19.32	27.67
Zm00001d006319_P001	Maize	nucleus	25.93	27.37
Bra026624.1-P	Field mustard	nucleus	20.17	27.17
Bra004050.1-P	Field mustard	nucleus	18.98	27.12
Bra017432.1-P	Field mustard	nucleus	20.0	26.82
Bra024841.1-P	Field mustard	nucleus	20.0	26.58
Bra038293.1-P	Field mustard	nucleus	29.66	19.75

Protein Annotations

EnsemblPlants:Bra026617.1	EnsemblPlants:Bra026617.1-P	EnsemblPlantsGene:Bra026617	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676
GO:GO:0005488	GO:GO:0046872	InterPro:IPR013087	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type
PANTHER:PTHR10593	PANTHER:PTHR10593:SF50	PFAM:PF12171	PFscan:PS50157	ScanProsite:PS00028	SEG:seg
SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI0002546A88	UniProt:M4ECV7	MapMan:15.5.15	:

Description

AT2G02070 (E=5e-232) AtIDD5 | AtIDD5 (Arabidopsis thaliana Indeterminate(ID)-Domain 5); nucleic acid binding / transcription factor/ zinc ion binding

Coordinates

chrA02:-:20726227..20735147

Molecular Weight (calculated)

63626.2 Da

IEP (calculated)

9.205

GRAVY (calculated)

-0.840

Length

590 amino acids

Sequence
(BLAST)

001: MAASSSSNAS FFGVREEDQT HLLPPNPSAA VAPPPHHQPP QSQQPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPTCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNSNNNSS SMMLGLSHTG PPQNLDHHSG DVLRLGSGEG VGEGAASRSS SDLIAANSSG YFMQDQNHSF
301: HDQQQGFLAA SNNIKPSPMN FQQSLMQFSH DSHNSPSSNL FNLSFLSGNN GVASATSNHN AAAVSSGNLM ISNHFDGENA IGGGGGGEGS TGLFPNNMIN
401: STDRTSSGAV PSLFSSSMQN PISTPQMSAT ALLQKAAQMG STSSNNNNNN NNNGSSNNNN NNASSILRNF GSGMYGENES NLYDLMNSFS NPDPTGNNSN
501: GVNSPFGSYR GVNKGLNADK QSLTRDFLGV GQIVRSMSGS GGVQQQQQQH GNSRERVGSS SDSVDRNSNT FNPGGGPATS PPYGIHHASF

Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Arabidopsis Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.