CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09390	Canola	nucleus	19.17	89.08
CDY04118	Canola	nucleus	19.17	89.08
Zm00001d031992_P001	Maize	nucleus	89.87	82.15
Os08t0554400-02	Rice	nucleus	73.96	74.64
CDY53540	Canola	nucleus	23.69	67.53
CDY04117	Canola	nucleus	25.68	66.36
KRG89168	Soybean	nucleus, plastid	35.26	56.03
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	34.72	52.75
GSMUA_Achr4P04310_001	Banana	nucleus	40.87	47.78
OQU89911	Sorghum	nucleus, plastid	43.94	45.59
EES11271	Sorghum	nucleus	47.56	43.91
KRH49489	Soybean	nucleus, plastid	41.41	42.96
VIT_01s0010g02100.t01	Wine grape	nucleus	43.94	42.48
KRH49485	Soybean	nucleus	41.59	42.36
KRG90705	Soybean	nucleus	43.04	41.98
KRG89167	Soybean	nucleus, plastid	41.23	41.53
KRH36039	Soybean	nucleus	42.86	41.51
PGSC0003DMT400075837	Potato	nucleus	38.88	41.51
Solyc04g008500.2.1	Tomato	nucleus	38.7	41.39
KXG31026	Sorghum	nucleus	44.48	41.34
CDY59418	Canola	nucleus	30.74	41.16
KRG91985	Soybean	nucleus	40.51	40.0
KRH34792	Soybean	nucleus	39.96	39.82
CDY45271	Canola	nucleus	29.84	39.66
GSMUA_Achr11P...	Banana	nucleus	38.16	39.59
EES02307	Sorghum	nucleus	35.26	39.16
CDY03081	Canola	nucleus	37.07	39.12
CDY17440	Canola	nucleus	33.82	39.12
EES02157	Sorghum	nucleus	33.82	38.88
CDY17615	Canola	nucleus	36.89	38.71
CDY15814	Canola	nucleus	32.55	38.05
Bra026204.1-P	Field mustard	nucleus, plastid	30.92	38.0
CDY45270	Canola	nucleus	30.92	38.0
GSMUA_Achr11P...	Banana	nucleus	35.08	37.96
Bra026819.1-P	Field mustard	nucleus	32.01	37.9
KXG36163	Sorghum	nucleus	39.78	37.8
AT2G02080.3	Thale cress	nucleus, plastid	35.26	37.79
CDX81653	Canola	nucleus	31.83	37.69
AT1G14580.3	Thale cress	nucleus	32.73	37.63
Bra026616.1-P	Field mustard	nucleus	34.54	37.38
EER95332	Sorghum	nucleus	35.26	37.14
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	44.3	37.07
CDY17614	Canola	nucleus, plastid	34.36	37.04
EES00944	Sorghum	nucleus	32.19	37.01
Bra024834.1-P	Field mustard	nucleus, plastid	36.89	36.96
Bra024833.1-P	Field mustard	plastid	34.18	36.84
CDY09391	Canola	nucleus	37.61	36.68
CDY03080	Canola	nucleus, plastid	34.0	36.43
CDY15811	Canola	nucleus	37.25	36.27
KXG38489	Sorghum	nucleus	28.03	36.22
Bra026203.1-P	Field mustard	nucleus, plastid	29.84	35.56
Bra026617.1-P	Field mustard	nucleus	37.61	35.25
EES05153	Sorghum	nucleus	31.28	35.23
KXG30322	Sorghum	nucleus	30.2	35.16
Bra040974.1-P	Field mustard	nucleus, plastid	36.53	34.53
AT2G02070.2	Thale cress	nucleus	36.89	33.89
EES04172	Sorghum	nucleus	31.46	33.46
Bra023223.1-P	Field mustard	plastid	28.03	32.29
CDY12268	Canola	nucleus	24.41	30.27
CDY68983	Canola	nucleus	20.61	29.16
KXG39813	Sorghum	nucleus, plastid	21.34	25.71
EER96827	Sorghum	nucleus	22.6	25.05
EES13982	Sorghum	nucleus	23.51	24.25
EER97442	Sorghum	nucleus	32.37	22.83

Protein Annotations

MapMan:15.5.15	Gene3D:3.30.160.60	UniProt:A0A1B6PIA3	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
GO:GO:0046872	InterPro:IPR013087	EnsemblPlants:KXG25416	ProteinID:KXG25416	ProteinID:KXG25416.1	PFAM:PF12171
ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF66	SMART:SM00355	EnsemblPlantsGene:SORBI_3007G173200
SUPFAM:SSF57667	UniParc:UPI00081ABB01	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:60835255..60843695

Molecular Weight (calculated)

58123.2 Da

IEP (calculated)

9.669

GRAVY (calculated)

-0.592

Length

553 amino acids

Sequence
(BLAST)

001: MAAASSSAHL FGLGDAQMQM QQPPPPQQHQ HQHQQAAAPP PPNPAAPAPK KKRNQPGNPT DPDAEVIALS PKTLLATNRF VCEVCNKGFQ REQNLQLHRR
101: GHNLPWKLKQ KNPKDVRRRV YLCPEPTCVH HDPSRALGDL TGIKKHYCRK HGEKKWKCDK CNKRYAVQSD WKAHSKTCGT REYRCDCGTL FSRRDSFITH
201: RAFCDALAQE SARVPPIGAG MYGTGGMALG LSGMAASHQL QSFQDQAHSS ATTTIGSNPA AQFEHLMQPS TGSPAFRGAQ PTSSSSSPFY LGGAEDGHQS
301: QPSHSSLLHG NKQVYHGLMQ LPEQHQPGSN NGLLNLGFFS GGSGGQDARL VFPDQFNGAM GGNVRGDGRE HGNSGANTES AAIFSGNLMG NQMASSAGFS
401: SSLYNSSETV APPQMSATAL LQKAAQMGAT TSSGNVNSLL RGLGNGGGTL NGRPAAGAAR FMAGESSSSR STSQAENESQ FRDLMNTLAA SGSGAGTAFS
501: GGFPGMDGSK LSTRDFLGVG GGGVMRSMGG AAGLPLRHGA AGIGMGSLDP EMK

Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Arabidopsis Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.