Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 6
- nucleus 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04118 | Canola | nucleus | 22.48 | 97.48 |
| Bra024833.1-P | Field mustard | plastid | 96.9 | 97.47 |
| CDY17614 | Canola | nucleus, plastid | 96.9 | 97.47 |
| CDY09390 | Canola | nucleus | 22.09 | 95.8 |
| CDY17440 | Canola | nucleus | 79.07 | 85.36 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 84.11 | 84.11 |
| CDY15814 | Canola | nucleus | 75.39 | 82.24 |
| CDY53540 | Canola | nucleus | 30.04 | 79.9 |
| CDY14910 | Canola | nucleus | 18.22 | 70.68 |
| CDY04117 | Canola | nucleus | 28.49 | 68.69 |
| CDY59418 | Canola | nucleus | 53.68 | 67.07 |
| CDY37489 | Canola | nucleus | 23.45 | 65.76 |
| CDX81653 | Canola | nucleus | 59.5 | 65.74 |
| CDY72283 | Canola | nucleus | 24.03 | 65.61 |
| CDY70142 | Canola | nucleus | 18.6 | 52.75 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 33.72 | 47.8 |
| CDY03081 | Canola | nucleus | 47.48 | 46.76 |
| CDY17615 | Canola | nucleus | 47.67 | 46.68 |
| KRG89168 | Soybean | nucleus, plastid | 31.2 | 46.26 |
| CDY09391 | Canola | nucleus | 48.26 | 43.92 |
| CDY15811 | Canola | nucleus | 47.67 | 43.31 |
| GSMUA_Achr3P13990_001 | Banana | nucleus | 34.88 | 42.25 |
| CDX97281 | Canola | nucleus, plastid | 31.4 | 42.08 |
| GSMUA_Achr5P11770_001 | Banana | nucleus, plastid | 31.78 | 41.21 |
| CDX96046 | Canola | nucleus | 18.6 | 41.2 |
| CDY22307 | Canola | nucleus | 36.43 | 40.52 |
| CDX94759 | Canola | nucleus | 36.24 | 40.3 |
| CDX91304 | Canola | nucleus, plastid | 31.4 | 40.1 |
| GSMUA_Achr1P17940_001 | Banana | nucleus | 36.24 | 40.04 |
| CDY24490 | Canola | nucleus | 33.53 | 39.77 |
| CDY18188 | Canola | nucleus | 36.63 | 39.46 |
| GSMUA_Achr1P07110_001 | Banana | nucleus | 37.02 | 39.3 |
| CDX77936 | Canola | nucleus | 33.14 | 39.22 |
| CDX89862 | Canola | nucleus | 36.43 | 39.17 |
| GSMUA_Achr10P... | Banana | nucleus | 36.05 | 38.83 |
| CDY45271 | Canola | nucleus | 31.2 | 38.7 |
| CDX75732 | Canola | nucleus | 32.95 | 38.37 |
| CDY32514 | Canola | nucleus | 36.24 | 38.16 |
| CDX82515 | Canola | nucleus | 32.17 | 37.64 |
| CDX86010 | Canola | nucleus | 32.56 | 37.5 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 34.11 | 37.21 |
| CDY11241 | Canola | nucleus | 36.24 | 37.18 |
| CDY45270 | Canola | nucleus | 32.36 | 37.11 |
| CDY53836 | Canola | nucleus | 32.36 | 36.87 |
| CDY67009 | Canola | nucleus | 33.91 | 36.76 |
| GSMUA_Achr9P23870_001 | Banana | nucleus | 30.81 | 36.64 |
| Os09t0555700-02 | Rice | nucleus | 37.98 | 36.64 |
| GSMUA_Achr4P11810_001 | Banana | mitochondrion, nucleus | 34.69 | 36.53 |
| CDY55238 | Canola | nucleus | 34.3 | 36.42 |
| CDY44344 | Canola | nucleus | 35.27 | 36.4 |
| PGSC0003DMT400075837 | Potato | nucleus | 36.43 | 36.29 |
| CDX80854 | Canola | nucleus | 35.47 | 36.24 |
| CDY51742 | Canola | nucleus | 33.91 | 36.16 |
| CDX97521 | Canola | nucleus | 33.91 | 36.08 |
| KRH49489 | Soybean | nucleus, plastid | 37.21 | 36.02 |
| KRH49485 | Soybean | nucleus | 37.79 | 35.91 |
| CDY10404 | Canola | nucleus | 35.27 | 35.9 |
| Solyc04g008500.2.1 | Tomato | nucleus | 35.66 | 35.59 |
| GSMUA_Achr1P02080_001 | Banana | nucleus | 37.4 | 35.28 |
| GSMUA_Achr4P05240_001 | Banana | nucleus | 34.11 | 35.2 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 33.33 | 35.17 |
| TraesCS5B01G358600.1 | Wheat | nucleus, plastid | 37.21 | 35.16 |
| Os08t0554400-02 | Rice | nucleus | 37.21 | 35.04 |
| CDX70328 | Canola | nucleus | 34.88 | 35.02 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 38.76 | 34.97 |
| CDY57128 | Canola | nucleus | 33.33 | 34.96 |
| KRG90705 | Soybean | nucleus | 38.37 | 34.92 |
| TraesCS5A01G356100.1 | Wheat | nucleus, plastid | 36.82 | 34.86 |
| KRG89167 | Soybean | nucleus, plastid | 37.02 | 34.79 |
| CDX81372 | Canola | nucleus | 32.95 | 34.76 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 36.82 | 34.73 |
| Zm00001d021403_P001 | Maize | nucleus | 32.56 | 34.71 |
| GSMUA_Achr11P... | Banana | nucleus | 35.85 | 34.71 |
| KRH34792 | Soybean | nucleus | 37.21 | 34.59 |
| OQU89911 | Sorghum | nucleus, plastid | 35.66 | 34.52 |
| KRH36039 | Soybean | nucleus | 38.18 | 34.5 |
| KRG91985 | Soybean | nucleus | 37.4 | 34.46 |
| GSMUA_Achr11P... | Banana | nucleus | 34.11 | 34.44 |
| KXG25416 | Sorghum | nucleus | 36.43 | 34.0 |
| EES11271 | Sorghum | nucleus | 37.4 | 32.22 |
| Zm00001d026113_P006 | Maize | nucleus | 37.21 | 32.05 |
| Zm00001d017560_P001 | Maize | nucleus | 35.85 | 31.79 |
| TraesCS6B01G271000.1 | Wheat | nucleus | 35.47 | 31.77 |
| KXG31026 | Sorghum | nucleus | 36.63 | 31.76 |
| TraesCS6A01G254500.1 | Wheat | nucleus | 35.47 | 31.66 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 35.47 | 31.66 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 37.4 | 31.54 |
| Os04t0566400-02 | Rice | nucleus | 37.4 | 31.48 |
| Zm00001d031992_P001 | Maize | nucleus | 36.63 | 31.24 |
| Os02t0672100-01 | Rice | nucleus | 36.82 | 30.89 |
| CDY12268 | Canola | nucleus | 26.36 | 30.49 |
| Zm00001d002654_P003 | Maize | nucleus | 37.21 | 30.33 |
| GSMUA_Achr11P... | Banana | nucleus | 33.14 | 30.21 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 37.6 | 29.26 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 37.4 | 29.15 |
| KXG36163 | Sorghum | nucleus | 32.75 | 29.04 |
| CDY36123 | Canola | nucleus | 21.12 | 28.84 |
| CDY51986 | Canola | nucleus | 21.12 | 28.84 |
| CDX84974 | Canola | nucleus | 21.12 | 28.46 |
| CDY60366 | Canola | nucleus | 20.93 | 28.2 |
| CDY68983 | Canola | nucleus | 21.32 | 28.13 |
| Zm00001d006319_P001 | Maize | nucleus | 30.23 | 27.91 |
| CDY04204 | Canola | nucleus | 19.38 | 27.86 |
| CDY04203 | Canola | plastid | 19.96 | 26.75 |
| CDY70938 | Canola | cytosol, nucleus | 14.15 | 26.74 |
| CDY09400 | Canola | nucleus | 22.09 | 26.03 |
| CDY17620 | Canola | nucleus | 22.29 | 25.9 |
| CDY07400 | Canola | nucleus | 20.54 | 25.67 |
| CDY15800 | Canola | nucleus | 21.9 | 25.57 |
| CDY60095 | Canola | nucleus | 21.9 | 25.57 |
| CDY67587 | Canola | cytosol, nucleus | 11.05 | 25.33 |
| CDY63960 | Canola | nucleus | 22.09 | 25.28 |
| CDY04102 | Canola | nucleus | 21.9 | 25.17 |
Protein Annotations
| EnsemblPlants:CDY03080 | EnsemblPlantsGene:GSBRNA2T00115420001 | Gene3D:3.30.160.60 | GO:A0A078EM82 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF66 |
| PFAM:PF13912 | PFscan:PS50157 | ProteinID:CDY03080 | ProteinID:CDY03080.1 | ScanProsite:PS00028 | SEG:seg |
| SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EE621B | MapMan:15.5.15 | : | : |
Description
BnaC07g21470D
Coordinates
chrLK031939:+:840432..843762
Molecular Weight (calculated)
55924.0 Da
IEP (calculated)
8.984
GRAVY (calculated)
-0.631
Length
516 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTSSYNTSA VPSSSSTQPF FITGSSAGDN AFDRKDTFMS MVQQPNSSAP QPKKRRNQPG NPSNLIDQTD PDAEVVALSP TTLMATNRFI CDVCKKGFQR
101: EQNLQLHRRG HNLPWKLKQK STKEVKRKVY ICPEPTCVHH DPARALGDLT GVKKHYYRKH GEKKWKCDKC SKRYAVQSDW KAHSKTCGTK EYRCDCGTIF
201: SRRDSYITHR AFCDALIQET VRNPTVSFTS MTAASSGAGF RGFHGKLEGG NALSHQHLSD HPNSGFSSFG GYNLNIASSE NSREFAPQTS NPNFLIQCSS
301: SQGMLPAPNN NNNDQSFMNQ QGLIQFDPVN NINLKSSTTN NSFFNLGFFQ ENTKNSETAI PSLYSTDSLV HHREESLNAG SNVSATALLQ KATQLGSITS
401: NDPSALFRSL ASSSNSSSVV VNDFGGGQIM GNDNNGNLQG LMNSLVAVNG GGAGGSGGNI FDVDFGNNNV NMSGSDNLTL DFLGVGGMVR NVNRGGAGRG
501: RVRGDVSLNG ELKFPE
101: EQNLQLHRRG HNLPWKLKQK STKEVKRKVY ICPEPTCVHH DPARALGDLT GVKKHYYRKH GEKKWKCDKC SKRYAVQSDW KAHSKTCGTK EYRCDCGTIF
201: SRRDSYITHR AFCDALIQET VRNPTVSFTS MTAASSGAGF RGFHGKLEGG NALSHQHLSD HPNSGFSSFG GYNLNIASSE NSREFAPQTS NPNFLIQCSS
301: SQGMLPAPNN NNNDQSFMNQ QGLIQFDPVN NINLKSSTTN NSFFNLGFFQ ENTKNSETAI PSLYSTDSLV HHREESLNAG SNVSATALLQ KATQLGSITS
401: NDPSALFRSL ASSSNSSSVV VNDFGGGQIM GNDNNGNLQG LMNSLVAVNG GGAGGSGGNI FDVDFGNNNV NMSGSDNLTL DFLGVGGMVR NVNRGGAGRG
501: RVRGDVSLNG ELKFPE
001: MSSSSYNTSV IPSSSSSAQP FFITSSGTGD NDFNRKDTFM SMIQQPNSSA PPPKKRRNQP GNPNPDAEVV ALSPKTLMAT NRFICDVCNK GFQREQNLQL
101: HRRGHNLPWK LKQKSTKEVK RKVYLCPEPT CVHHDPSRAL GDLTGIKKHY YRKHGEKKWK CEKCSKRYAV QSDWKAHSKT CGTKEYRCDC GTIFSRRDSY
201: ITHRAFCDAL IQETARNPTV SFTSMTAASS GVGSGGIYGR LGGGSALSHH HLSDHPNFGF NPLVGYNLNI ASSDNRRDFI PQSSNPNFLI QSASSQGMLN
301: TTPNNNNQSF MNQHGLIQFD PVDNINLKSS GTNNSFFNLG FFQENTKNSE TSLPSLYSTD VLVHHREENL NAGSNVSATA LLQKATQMGS VTSNDPSALF
401: RGLASSSNSS SVIANHFGGG RIMENDNNGN LQGLMNSLAA VNGGGGSGGS IFDVQFGDNG NMSGSDKLTL DFLGVGGMVR NVNRGGGGGG RGSARGGVSL
501: DGEAKFPEQN YPFGRG
101: HRRGHNLPWK LKQKSTKEVK RKVYLCPEPT CVHHDPSRAL GDLTGIKKHY YRKHGEKKWK CEKCSKRYAV QSDWKAHSKT CGTKEYRCDC GTIFSRRDSY
201: ITHRAFCDAL IQETARNPTV SFTSMTAASS GVGSGGIYGR LGGGSALSHH HLSDHPNFGF NPLVGYNLNI ASSDNRRDFI PQSSNPNFLI QSASSQGMLN
301: TTPNNNNQSF MNQHGLIQFD PVDNINLKSS GTNNSFFNLG FFQENTKNSE TSLPSLYSTD VLVHHREENL NAGSNVSATA LLQKATQMGS VTSNDPSALF
401: RGLASSSNSS SVIANHFGGG RIMENDNNGN LQGLMNSLAA VNGGGGSGGS IFDVQFGDNG NMSGSDKLTL DFLGVGGMVR NVNRGGGGGG RGSARGGVSL
501: DGEAKFPEQN YPFGRG
Arabidopsis Description
IDD4Protein indeterminate-domain 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8GYC1]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.