Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G421100.1 | Wheat | nucleus | 91.69 | 99.18 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 98.49 | 98.34 |
| CDY04118 | Canola | nucleus | 15.71 | 87.39 |
| CDY09390 | Canola | nucleus | 15.56 | 86.55 |
| EES11271 | Sorghum | nucleus | 77.34 | 85.48 |
| Os04t0566400-02 | Rice | nucleus | 76.13 | 82.22 |
| Zm00001d026113_P006 | Maize | nucleus | 72.81 | 80.47 |
| Zm00001d002654_P003 | Maize | nucleus | 75.08 | 78.52 |
| TraesCS6D01G235800.1 | Wheat | nucleus | 63.44 | 72.66 |
| Os02t0672100-01 | Rice | nucleus | 66.31 | 71.38 |
| CDY53540 | Canola | nucleus | 19.34 | 65.98 |
| CDY04117 | Canola | nucleus | 21.15 | 65.42 |
| KRG89168 | Soybean | nucleus, plastid | 30.51 | 58.05 |
| TraesCS5D01G364900.1 | Wheat | nucleus, plastid | 37.92 | 45.89 |
| GSMUA_Achr10P... | Banana | nucleus | 32.33 | 44.68 |
| KRH49489 | Soybean | nucleus, plastid | 35.8 | 44.47 |
| KRG90705 | Soybean | nucleus | 37.61 | 43.92 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 37.92 | 43.88 |
| CDY03081 | Canola | nucleus | 34.29 | 43.32 |
| KRH36039 | Soybean | nucleus | 37.16 | 43.08 |
| CDY17615 | Canola | nucleus | 34.14 | 42.88 |
| KRG89167 | Soybean | nucleus, plastid | 35.2 | 42.44 |
| CDY59418 | Canola | nucleus | 26.28 | 42.13 |
| KRH49485 | Soybean | nucleus | 34.44 | 41.99 |
| TraesCS3D01G107300.1 | Wheat | nucleus | 30.82 | 41.8 |
| TraesCS3D01G171300.1 | Wheat | nucleus | 30.97 | 41.75 |
| CDY17440 | Canola | nucleus | 30.06 | 41.63 |
| PGSC0003DMT400075837 | Potato | nucleus | 32.33 | 41.31 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 34.14 | 40.94 |
| CDY45271 | Canola | nucleus | 25.68 | 40.87 |
| Solyc04g008500.2.1 | Tomato | nucleus | 31.72 | 40.62 |
| CDY15814 | Canola | nucleus | 29.0 | 40.59 |
| KRH34792 | Soybean | nucleus | 33.99 | 40.54 |
| TraesCS3D01G209800.1 | Wheat | nucleus | 29.0 | 40.51 |
| TraesCS6D01G116300.1 | Wheat | nucleus | 24.92 | 40.44 |
| KRG91985 | Soybean | nucleus | 33.99 | 40.18 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 31.27 | 40.12 |
| CDY15811 | Canola | nucleus | 34.29 | 39.96 |
| CDY09391 | Canola | nucleus | 34.14 | 39.86 |
| Bra026616.1-P | Field mustard | nucleus | 30.66 | 39.73 |
| Bra026819.1-P | Field mustard | nucleus | 27.79 | 39.4 |
| CDX81653 | Canola | nucleus | 27.64 | 39.19 |
| CDY45270 | Canola | nucleus | 26.43 | 38.89 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 26.43 | 38.89 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 34.14 | 38.63 |
| GSMUA_Achr11P... | Banana | nucleus | 32.93 | 38.52 |
| CDY17614 | Canola | nucleus, plastid | 29.76 | 38.4 |
| AT2G02070.2 | Thale cress | nucleus | 34.89 | 38.37 |
| Bra026617.1-P | Field mustard | nucleus | 34.14 | 38.31 |
| Bra024833.1-P | Field mustard | plastid | 29.61 | 38.21 |
| TraesCS4D01G262500.1 | Wheat | nucleus | 29.76 | 37.45 |
| CDY03080 | Canola | nucleus, plastid | 29.15 | 37.4 |
| TraesCS4D01G294900.1 | Wheat | nucleus | 27.34 | 37.4 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 37.31 | 37.37 |
| AT1G14580.3 | Thale cress | nucleus | 27.04 | 37.21 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 25.83 | 36.85 |
| TraesCS2D01G287500.1 | Wheat | nucleus | 25.38 | 36.44 |
| TraesCS3D01G449900.1 | Wheat | nucleus | 27.34 | 35.56 |
| Bra023223.1-P | Field mustard | plastid | 24.92 | 34.38 |
| CDY12268 | Canola | nucleus | 22.05 | 32.74 |
| CDY68983 | Canola | nucleus | 17.98 | 30.43 |
| TraesCS4D01G232000.1 | Wheat | nucleus, plastid | 17.82 | 28.5 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 18.73 | 25.25 |
| TraesCS2D01G199300.3 | Wheat | nucleus | 27.64 | 21.66 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G400300.2 | EnsemblPlantsGene:TraesCS2D01G400300 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF63 |
| PFAM:PF12171 | PFscan:PS50157 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 |
| MapMan:15.5.15 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:-:513761182..513767666
Molecular Weight (calculated)
68800.4 Da
IEP (calculated)
8.725
GRAVY (calculated)
-0.542
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MARGKPHAAV GGPDPHTLHD AAGLPKGGRR STANPRTIRS WCDDVGWEAM ASNSSAAAAA AFFGMRDGDQ QDQMKPLISQ QQQQHQQQLA AVALSGVGSA
101: APAASSQGAP AAAPPAKKKR TLPDPDAEVI ALSPKTLMAT NRFVCEVCNK GFQREQNLQL HRRGHNLPWK LKQKNPNQVQ RRRVYLCPEP TCVHHDPSRA
201: LGDLTGIKKH FCRKHGEKKW KCDKCSKRYA VQSDWKAHSK ICGTREYRCD CGTLFSRRDS FITHRAFCDA LAQESARLPP TSLSSLTSHL YGATNAGNMA
301: LSLSQVGSHL NSTLQHDGHH HHPSPELLRL GGAAGGGSSS IAARLDHLLS PSGASAFRPP QQQPQSAFFL NAAPGQDFGD EAGNGSHSYL QSKPFHGLMQ
401: LPDLQGNGAG GPASSGHGLF NLGFFSNNGN SSGSSHEHAS QGMMSNDQFS GGAGGGGGGG SEVSAAAIFG GNFVGGDHIS QAGMYNDQAP MLPQMSATAL
501: LQKAAQMGAT SSPNGAASMF RGFVGSSPHA RQGTPQQQMD QNDANLNELM NSLAAGGGVN AAAMFGGANG GPAGMFDPRM CDMDQHEVKF SQGGGGVGGN
601: GGGAGGGGGG GDMTRDFLGV GGGGIVRGIS TPRGDHHQSS SDMSSLEAEM KSASSFNGGR MP
101: APAASSQGAP AAAPPAKKKR TLPDPDAEVI ALSPKTLMAT NRFVCEVCNK GFQREQNLQL HRRGHNLPWK LKQKNPNQVQ RRRVYLCPEP TCVHHDPSRA
201: LGDLTGIKKH FCRKHGEKKW KCDKCSKRYA VQSDWKAHSK ICGTREYRCD CGTLFSRRDS FITHRAFCDA LAQESARLPP TSLSSLTSHL YGATNAGNMA
301: LSLSQVGSHL NSTLQHDGHH HHPSPELLRL GGAAGGGSSS IAARLDHLLS PSGASAFRPP QQQPQSAFFL NAAPGQDFGD EAGNGSHSYL QSKPFHGLMQ
401: LPDLQGNGAG GPASSGHGLF NLGFFSNNGN SSGSSHEHAS QGMMSNDQFS GGAGGGGGGG SEVSAAAIFG GNFVGGDHIS QAGMYNDQAP MLPQMSATAL
501: LQKAAQMGAT SSPNGAASMF RGFVGSSPHA RQGTPQQQMD QNDANLNELM NSLAAGGGVN AAAMFGGANG GPAGMFDPRM CDMDQHEVKF SQGGGGVGGN
601: GGGAGGGGGG GDMTRDFLGV GGGGIVRGIS TPRGDHHQSS SDMSSLEAEM KSASSFNGGR MP
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.