Factsheet for TraesCS2A01G403200.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G400300.2	Wheat	nucleus	98.34	98.49
TraesCS2B01G421100.1	Wheat	nucleus	90.5	98.04
CDY04118	Canola	nucleus	15.69	87.39
CDY09390	Canola	nucleus	15.54	86.55
EES11271	Sorghum	nucleus	76.47	84.64
Os04t0566400-02	Rice	nucleus	75.72	81.89
Zm00001d026113_P006	Maize	nucleus	72.4	80.13
Zm00001d002654_P003	Maize	nucleus	74.36	77.88
TraesCS6A01G254500.1	Wheat	nucleus	63.35	72.66
Os02t0672100-01	Rice	nucleus	65.91	71.06
CDY53540	Canola	nucleus	19.46	66.49
CDY04117	Canola	nucleus	21.12	65.42
KRG89168	Soybean	nucleus, plastid	30.32	57.76
TraesCS5A01G356100.1	Wheat	nucleus, plastid	37.25	45.32
GSMUA_Achr10P...	Banana	nucleus	31.98	44.26
KRH49489	Soybean	nucleus, plastid	35.44	44.09
KRG90705	Soybean	nucleus	37.41	43.74
VIT_01s0010g02100.t01	Wine grape	nucleus	37.71	43.71
CDY03081	Canola	nucleus	34.24	43.32
KRH36039	Soybean	nucleus	36.95	42.91
CDY17615	Canola	nucleus	34.09	42.88
KRG89167	Soybean	nucleus, plastid	35.14	42.44
CDY59418	Canola	nucleus	26.24	42.13
TraesCS3A01G170700.1	Wheat	nucleus	30.92	41.92
KRH49485	Soybean	nucleus	34.24	41.8
CDY17440	Canola	nucleus	30.02	41.63
PGSC0003DMT400075837	Potato	nucleus	32.28	41.31
Bra024834.1-P	Field mustard	nucleus, plastid	34.09	40.94
CDY15814	Canola	nucleus	29.11	40.8
TraesCS3A01G105100.1	Wheat	nucleus	30.47	40.73
KRH34792	Soybean	nucleus	34.09	40.72
CDY45271	Canola	nucleus	25.49	40.62
Solyc04g008500.2.1	Tomato	nucleus	31.67	40.62
KRG91985	Soybean	nucleus	34.09	40.36
AT2G02080.3	Thale cress	nucleus, plastid	31.37	40.31
CDY15811	Canola	nucleus	34.24	39.96
Bra026616.1-P	Field mustard	nucleus	30.77	39.92
CDY09391	Canola	nucleus	34.09	39.86
TraesCS3A01G205800.1	Wheat	nucleus	28.66	39.83
TraesCS6A01G126000.1	Wheat	nucleus	25.04	39.71
Bra026819.1-P	Field mustard	nucleus	27.9	39.61
CDX81653	Canola	nucleus	27.75	39.4
CDY45270	Canola	nucleus	26.24	38.67
Bra026204.1-P	Field mustard	nucleus, plastid	26.24	38.67
Bra040974.1-P	Field mustard	nucleus, plastid	34.09	38.63
CDY17614	Canola	nucleus, plastid	29.86	38.6
GSMUA_Achr11P...	Banana	nucleus	32.88	38.52
Bra024833.1-P	Field mustard	plastid	29.71	38.4
AT2G02070.2	Thale cress	nucleus	34.84	38.37
Bra026617.1-P	Field mustard	nucleus	34.09	38.31
CDY03080	Canola	nucleus, plastid	29.26	37.6
TraesCS4A01G041400.1	Wheat	nucleus	27.6	37.58
AT1G14580.3	Thale cress	nucleus	27.15	37.42
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	37.1	37.22
TraesCS4A01G008900.1	Wheat	nucleus	27.0	36.91
Bra026203.1-P	Field mustard	nucleus, plastid	25.64	36.64
TraesCS2A01G289500.1	Wheat	nucleus	25.19	34.58
Bra023223.1-P	Field mustard	plastid	24.89	34.38
CDY12268	Canola	nucleus	22.02	32.74
CDY68983	Canola	nucleus	17.95	30.43
TraesCS4A01G074700.1	Wheat	nucleus, plastid	18.1	28.92
TraesCS5A01G233700.1	Wheat	nucleus	18.7	25.25
TraesCS2A01G188400.2	Wheat	nucleus	27.45	21.93

Protein Annotations

EnsemblPlants:TraesCS2A01G403200.2	EnsemblPlantsGene:TraesCS2A01G403200	Gene3D:3.30.160.60	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488
InterPro:IPR013087	InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	PANTHER:PTHR10593	PANTHER:PTHR10593:SF63
PFAM:PF12171	PFscan:PS50157	ScanProsite:PS00028	SEG:seg	SMART:SM00355	SUPFAM:SSF57667
MapMan:15.5.15	:	:	:	:	:

Description

No Description!

Coordinates

chr2A:-:657809808..657816298

Molecular Weight (calculated)

69355.1 Da

IEP (calculated)

8.841

GRAVY (calculated)

-0.582

Length

663 amino acids

Sequence
(BLAST)

001: MARGKPHAAV GGPDPHTLHD AAGLPKGGRR RSTANPRTIR SWCDDLGWEP MASNSSAAAA AAFFGMRDGD QQDQMKPLIS QQQQQHHHHH QQHQLAAVAL
101: SGAGSAAPAA SSQGAPAAAP PAKKKRTLPD PDAEVIALSP KTLMATNRFV CEVCNKGFQR EQNLQLHRRG HNLPWKLKQK NPNQVQRRRV YLCPEPTCVH
201: HDPSRALGDL TGIKKHFCRK HGEKKWKCDK CSKRYAVQSD WKAHSKICGT REYRCDCGTL FSRRDSFITH RAFCDALAQE SARLPPTSLS SLTSHLYGAT
301: NAGNMALSLS QVGSHLNSTL QHDGHHHHPS PELLRLGGAA GGGSSSIAAR LDHLLSPSGA SAFRPPQQQP QSAFFLNAAP GQDFGDEAGN GSHSYLQSKP
401: FHGLMQLPDL QGNGAGGPAS SGHGLFNLGF FSNNGNSSGS SHEHASQGMM SNDQFSGGAG GGGSEVSAAA IFGGNFVGGD HISQAGMYND QAPMLPQMSA
501: TALLQKAAQM GATSSPNGAA SMFRGFVGSS PHGRQGTPQQ QMDQNDANLN ELMNSLAAGG GVNAAAMFGG ANGGPAGMFD PRMCDMDQHE VKFSQGGGGV
601: GGNGGGAGGG GGDMTRDFLG VGGGGIVRGI STPRGDHHQS SSDMSSLEAE MKSASSFNGG RMP

Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Arabidopsis Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.