Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d026113_P006 | Maize | nucleus | 89.82 | 89.82 |
| Zm00001d002654_P003 | Maize | nucleus | 93.16 | 88.15 |
| CDY04118 | Canola | nucleus | 17.03 | 85.71 |
| CDY09390 | Canola | nucleus | 16.86 | 84.87 |
| TraesCS2B01G421100.1 | Wheat | nucleus | 85.64 | 83.82 |
| Os04t0566400-02 | Rice | nucleus | 81.14 | 79.28 |
| TraesCS2D01G400300.2 | Wheat | nucleus | 85.48 | 77.34 |
| TraesCS2A01G403200.2 | Wheat | nucleus | 84.64 | 76.47 |
| Os02t0672100-01 | Rice | nucleus | 70.95 | 69.11 |
| KXG31026 | Sorghum | nucleus | 68.61 | 69.08 |
| CDY53540 | Canola | nucleus | 21.2 | 65.46 |
| CDY04117 | Canola | nucleus | 23.21 | 64.95 |
| KRG89168 | Soybean | nucleus, plastid | 32.89 | 56.61 |
| KXG25416 | Sorghum | nucleus | 43.91 | 47.56 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 41.57 | 43.53 |
| GSMUA_Achr10P... | Banana | nucleus | 34.72 | 43.42 |
| KRH49489 | Soybean | nucleus, plastid | 38.23 | 42.96 |
| KRG90705 | Soybean | nucleus | 40.57 | 42.86 |
| CDY03081 | Canola | nucleus | 37.4 | 42.75 |
| CDY17615 | Canola | nucleus | 37.4 | 42.5 |
| KRH36039 | Soybean | nucleus | 40.23 | 42.21 |
| OQU89911 | Sorghum | nucleus, plastid | 37.4 | 42.03 |
| KRH49485 | Soybean | nucleus | 38.06 | 41.99 |
| KRG89167 | Soybean | nucleus, plastid | 38.4 | 41.89 |
| CDY59418 | Canola | nucleus | 28.88 | 41.89 |
| CDY45271 | Canola | nucleus | 28.88 | 41.59 |
| EES02157 | Sorghum | nucleus | 33.06 | 41.16 |
| EES00944 | Sorghum | nucleus | 32.72 | 40.75 |
| CDY17440 | Canola | nucleus | 32.39 | 40.59 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 37.4 | 40.58 |
| PGSC0003DMT400075837 | Potato | nucleus | 34.89 | 40.35 |
| CDY15814 | Canola | nucleus | 31.72 | 40.17 |
| EES02307 | Sorghum | nucleus | 33.39 | 40.16 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 34.39 | 39.92 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 29.88 | 39.78 |
| CDY45270 | Canola | nucleus | 29.88 | 39.78 |
| Solyc04g008500.2.1 | Tomato | nucleus | 34.22 | 39.65 |
| CDY15811 | Canola | nucleus | 37.56 | 39.61 |
| CDY09391 | Canola | nucleus | 37.4 | 39.51 |
| KRH34792 | Soybean | nucleus | 36.56 | 39.46 |
| Bra026819.1-P | Field mustard | nucleus | 30.72 | 39.4 |
| Bra026616.1-P | Field mustard | nucleus | 33.56 | 39.33 |
| KRG91985 | Soybean | nucleus | 36.73 | 39.29 |
| CDX81653 | Canola | nucleus | 30.55 | 39.19 |
| EER95332 | Sorghum | nucleus | 33.72 | 38.48 |
| CDY17614 | Canola | nucleus, plastid | 32.89 | 38.4 |
| KXG38489 | Sorghum | nucleus | 27.38 | 38.32 |
| Bra024833.1-P | Field mustard | plastid | 32.72 | 38.21 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 37.23 | 38.12 |
| GSMUA_Achr11P... | Banana | nucleus | 35.89 | 37.99 |
| Bra026617.1-P | Field mustard | nucleus | 37.4 | 37.97 |
| AT2G02070.2 | Thale cress | nucleus | 38.06 | 37.87 |
| AT1G14580.3 | Thale cress | nucleus | 30.22 | 37.63 |
| CDY03080 | Canola | nucleus, plastid | 32.22 | 37.4 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 28.71 | 37.07 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 40.23 | 36.46 |
| KXG30322 | Sorghum | nucleus | 28.71 | 36.21 |
| EES05153 | Sorghum | nucleus | 29.55 | 36.05 |
| KXG36163 | Sorghum | nucleus | 34.22 | 35.22 |
| EES04172 | Sorghum | nucleus | 30.55 | 35.19 |
| Bra023223.1-P | Field mustard | plastid | 27.05 | 33.75 |
| CDY12268 | Canola | nucleus | 23.87 | 32.06 |
| CDY68983 | Canola | nucleus | 19.87 | 30.43 |
| KXG39813 | Sorghum | nucleus, plastid | 20.53 | 26.8 |
| EER96827 | Sorghum | nucleus | 20.87 | 25.05 |
| EES13982 | Sorghum | nucleus | 21.87 | 24.44 |
| EER97442 | Sorghum | nucleus | 30.38 | 23.21 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | EntrezGene:8057591 | UniProt:C5YE14 | EnsemblPlants:EES11271 | ProteinID:EES11271 |
| ProteinID:EES11271.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013087 |
| ProteinID:OQU82146.1 | PFAM:PF12171 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF63 |
| SMART:SM00355 | EnsemblPlantsGene:SORBI_3006G180900 | SUPFAM:SSF57667 | unigene:Sbi.17158 | UniParc:UPI0001A86D20 | RefSeq:XP_002446943.1 |
| InterPro:Znf_C2H2_jaz | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr6:+:53544243..53551658
Molecular Weight (calculated)
61776.5 Da
IEP (calculated)
8.678
GRAVY (calculated)
-0.427
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNSSAAAF FGVRDGDQQD QIKPLISPQQ QLAAALPGVA GAVPAASGQG APTAAAPQPP PKKKRTMPDP DAEVIALSPK TLLATNRFVC EVCNKGFQRE
101: QNLQLHRRGH NLPWKLKQKN PLQAQRRRVY LCPEPTCVHH DPARALGDLT GIKKHFCRKH GEKKWKCDKC SKRYAVQSDW KAHSKICGTR EYRCDCGTLF
201: SRRDSFITHR AFCDALAQES ARLPPTSLSS LTSHLYGATN AGNMALSLSQ VGSHLTSTLQ DGHHHHPSPE LLRLGAAAGG GGSSIAARLD HLLSPNGASA
301: FRSPQAPPSS ASFFLNAGAS VGQDFGDDAG NGPHSYLQAN KPFHGLMQLP DLQGNGAGGP GASGPSLFNL GFFANNGNSS GSSHEHASQG LMNNDQFSGG
401: AGGGGGGGGS EVSAAGIFGG NFVGGGDQVP PPGLYSDQAS MLPQMSATAL LQKAAQMGAT SSTNGGAASM FRGFVGSSSP HVRPATPHME QSDANLNDLM
501: NSLAGGGVGG GGMFGGGNGA VSAGMFDPRQ LCNMAEHEVK FGQGGGDMTR DFLGVGGGGI VRGISTPRGG GGDHQSSSDM SSLEAEMKSA SSFNGGRMP
101: QNLQLHRRGH NLPWKLKQKN PLQAQRRRVY LCPEPTCVHH DPARALGDLT GIKKHFCRKH GEKKWKCDKC SKRYAVQSDW KAHSKICGTR EYRCDCGTLF
201: SRRDSFITHR AFCDALAQES ARLPPTSLSS LTSHLYGATN AGNMALSLSQ VGSHLTSTLQ DGHHHHPSPE LLRLGAAAGG GGSSIAARLD HLLSPNGASA
301: FRSPQAPPSS ASFFLNAGAS VGQDFGDDAG NGPHSYLQAN KPFHGLMQLP DLQGNGAGGP GASGPSLFNL GFFANNGNSS GSSHEHASQG LMNNDQFSGG
401: AGGGGGGGGS EVSAAGIFGG NFVGGGDQVP PPGLYSDQAS MLPQMSATAL LQKAAQMGAT SSTNGGAASM FRGFVGSSSP HVRPATPHME QSDANLNDLM
501: NSLAGGGVGG GGMFGGGNGA VSAGMFDPRQ LCNMAEHEVK FGQGGGDMTR DFLGVGGGGI VRGISTPRGG GGDHQSSSDM SSLEAEMKSA SSFNGGRMP
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.