CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 5
nucleus 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89167	Soybean	nucleus, plastid	92.82	91.8
CDY04118	Canola	nucleus	20.07	91.6
CDY09390	Canola	nucleus	19.71	89.92
CDY53540	Canola	nucleus	25.78	72.16
CDY04117	Canola	nucleus	26.89	68.22
KRG91985	Soybean	nucleus	69.06	66.96
KRH34792	Soybean	nucleus	68.14	66.67
KRG89168	Soybean	nucleus, plastid	40.52	63.22
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	41.44	61.81
KRH67268	Soybean	nucleus	27.07	56.32
GSMUA_Achr5P11770_001	Banana	nucleus, plastid	39.78	54.27
GSMUA_Achr4P11810_001	Banana	mitochondrion, nucleus	47.7	52.86
GSMUA_Achr9P23870_001	Banana	nucleus	41.44	51.84
VIT_01s0010g02100.t01	Wine grape	nucleus	54.51	51.75
KRG90705	Soybean	nucleus	53.78	51.5
GSMUA_Achr4P04310_001	Banana	nucleus	44.57	51.16
KRH36039	Soybean	nucleus	53.59	50.96
GSMUA_Achr1P07110_001	Banana	nucleus	45.49	50.82
VIT_01s0010g02090.t01	Wine grape	extracellular, vacuole	60.96	50.08
KRH49489	Soybean	nucleus, plastid	48.8	49.72
GSMUA_Achr3P13990_001	Banana	nucleus	38.49	49.06
GSMUA_AchrUn_...	Banana	mitochondrion, nucleus	43.46	48.26
GSMUA_Achr10P...	Banana	nucleus	42.17	47.81
GSMUA_Achr1P17940_001	Banana	nucleus	40.7	47.32
GSMUA_Achr1P02080_001	Banana	nucleus	46.78	46.44
Zm00001d021403_P001	Maize	nucleus	40.7	45.66
PGSC0003DMT400075837	Potato	nucleus	43.28	45.37
OQU89911	Sorghum	nucleus, plastid	44.2	45.03
Solyc04g008500.2.1	Tomato	nucleus	42.73	44.87
Os09t0555700-02	Rice	nucleus	43.65	44.3
TraesCS5D01G364900.1	Wheat	nucleus, plastid	43.65	43.33
CDY45271	Canola	nucleus	33.15	43.27
TraesCS5A01G356100.1	Wheat	nucleus, plastid	43.28	43.12
TraesCS5B01G358600.1	Wheat	nucleus, plastid	43.28	43.04
KRH15560	Soybean	nucleus	32.04	42.65
Bra026204.1-P	Field mustard	nucleus, plastid	34.62	41.78
CDY59418	Canola	nucleus	31.68	41.65
KXG25416	Sorghum	nucleus	42.36	41.59
KRH25657	Soybean	nucleus	35.91	41.4
CDY17615	Canola	nucleus	39.96	41.18
KRH55868	Soybean	nucleus	35.91	41.14
CDY45270	Canola	nucleus	34.07	41.11
GSMUA_Achr11P...	Banana	nucleus	40.33	41.09
CDY03081	Canola	nucleus	39.59	41.03
Os08t0554400-02	Rice	nucleus	41.25	40.88
GSMUA_Achr4P05240_001	Banana	nucleus	37.57	40.8
KRH49655	Soybean	nucleus	27.07	40.61
KRH22332	Soybean	nucleus	35.36	40.51
CDY17440	Canola	nucleus	35.54	40.38
KRH32064	Soybean	nucleus	34.25	40.17
KRH26995	Soybean	nucleus	35.36	40.0
KRH71370	Soybean	nucleus	33.7	39.96
KRH10015	Soybean	nucleus	34.81	39.79
KRH05443	Soybean	nucleus	32.23	39.77
Bra026819.1-P	Field mustard	nucleus	34.07	39.61
CDX81653	Canola	nucleus	34.07	39.61
KRH47108	Soybean	nucleus	36.28	39.56
KRH23306	Soybean	nucleus	34.81	39.38
GSMUA_Achr11P...	Banana	nucleus	37.02	39.33
CDY15814	Canola	nucleus	34.25	39.32
Bra024834.1-P	Field mustard	nucleus, plastid	39.96	39.31
KRH51873	Soybean	nucleus	33.89	39.23
Bra026203.1-P	Field mustard	nucleus, plastid	33.52	39.22
CDY09391	Canola	nucleus	40.88	39.15
AT2G02080.3	Thale cress	nucleus, plastid	37.2	39.15
KRG95590	Soybean	nucleus	32.78	38.7
CDY15811	Canola	nucleus	40.33	38.56
Bra026616.1-P	Field mustard	nucleus	36.1	38.36
CDY17614	Canola	nucleus, plastid	36.1	38.21
EES11271	Sorghum	nucleus	41.99	38.06
Zm00001d026113_P006	Maize	nucleus	41.99	38.06
AT1G14580.3	Thale cress	nucleus	33.7	38.05
Bra024833.1-P	Field mustard	plastid	35.91	38.01
KRH61193	Soybean	nucleus	32.97	37.84
CDY03080	Canola	nucleus, plastid	35.91	37.79
Bra026617.1-P	Field mustard	nucleus	40.88	37.63
GSMUA_Achr11P...	Banana	nucleus	39.04	37.46
Zm00001d031992_P001	Maize	nucleus	41.62	37.36
KRH76829	Soybean	nucleus	35.54	37.33
TraesCS2B01G421100.1	Wheat	nucleus	41.99	37.25
TraesCS6A01G254500.1	Wheat	nucleus	39.59	37.2
Os04t0566400-02	Rice	nucleus	41.99	37.19
TraesCS6B01G271000.1	Wheat	nucleus	39.41	37.15
Bra040974.1-P	Field mustard	nucleus, plastid	39.96	37.09
KRG95964	Soybean	nucleus	34.81	37.06
TraesCS6D01G235800.1	Wheat	nucleus	39.41	37.02
KRH71547	Soybean	nucleus	29.65	37.01
KRH44134	Soybean	nucleus	36.1	36.98
Zm00001d017560_P001	Maize	nucleus	39.59	36.94
KRG92880	Soybean	nucleus	35.91	36.86
KRH67672	Soybean	nucleus	34.62	36.58
AT2G02070.2	Thale cress	nucleus	40.52	36.54
KRH33908	Soybean	nucleus, plastid	35.91	36.52
KRH19850	Soybean	nucleus	35.17	36.38
Os02t0672100-01	Rice	nucleus	41.07	36.26
KRH68150	Soybean	nucleus	30.2	36.2
KXG31026	Sorghum	nucleus	39.59	36.13
KRH32442	Soybean	nucleus	35.17	35.9
KRH24905	Soybean	nucleus	35.73	35.86
Bra023223.1-P	Field mustard	plastid	31.68	35.83
Zm00001d002654_P003	Maize	nucleus	41.62	35.7
KRG96409	Soybean	nucleus	34.99	35.51
KXG36163	Sorghum	nucleus	37.94	35.4
KRH08298	Soybean	nucleus	33.15	35.23
KRH68532	Soybean	nucleus	33.15	35.16
KRH69941	Soybean	nucleus, plastid	33.7	34.86
KRH69942	Soybean	nucleus	33.7	34.86
TraesCS2D01G400300.2	Wheat	nucleus	41.99	34.44
KRG89014	Soybean	nucleus	36.28	34.32
KRG96824	Soybean	nucleus	32.04	34.32
TraesCS2A01G403200.2	Wheat	nucleus	41.8	34.24
KRH26399	Soybean	nucleus	31.49	34.2
Zm00001d006319_P001	Maize	nucleus	35.17	34.17
CDY12268	Canola	nucleus	27.99	34.08
KRH22919	Soybean	nucleus	31.49	33.6
CDY68983	Canola	nucleus	23.2	32.23
KRH41885	Soybean	nucleus	21.18	30.26
KRH58582	Soybean	nucleus	23.39	28.86
KRH60588	Soybean	nucleus	20.99	28.5
KRH42485	Soybean	nucleus	23.57	28.32
KRH38986	Soybean	nucleus	23.2	26.58
KRH48724	Soybean	nucleus	23.2	26.09

Protein Annotations

EntrezGene:100806198	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02004370	EnsemblPlantsGene:GLYMA_07G158000	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	InterPro:IPR013087	UniProt:K7L200	EnsemblPlants:KRH49485	ProteinID:KRH49485
ProteinID:KRH49485.1	ScanProsite:PS00028	PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF50	SMART:SM00355
SUPFAM:SSF57667	UniParc:UPI000294ED5F	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:19553459..19558583

Molecular Weight (calculated)

59549.3 Da

IEP (calculated)

9.497

GRAVY (calculated)

-0.760

Length

543 amino acids

Sequence
(BLAST)

001: MASASSSTPF LGIRQENQSQ FTQQHQSSTT AASSTTTTTP TTVPQKKRRN QPGTPYPDAE VIALSPKTLM ATNRFLCEVC NKGFQREQNL QLHRRGHNLP
101: WKLKQKTNKE PKRKVYLCPE PTCVHHDPSR ALGDLTGIKK HYSRKHGEKK WKCDKCSKKY AVQSDWKAHS KTCGTREYRC DCGTLFSRRD SFITHRAFCD
201: ALAHESARHP SSVNHLGTHH LYGTNHMSLG LGAQLQNHQI SATNSILSLG SEPKFEHLIS PNLHHSSSSS FGVQSPQSSS FFMTDPNHAF QDLQSQNQGH
301: LFSNKQLHGL MQLPDLQGNT NNNSTTSASS LSASANNTNL FNLSFFPNTN TSGSIINDQF SNISGGNNNQ GTATLYSTNS PVSNNHVGNS SLSSLFGNSS
401: VQQDNMSPHM SATALLQKAA QMSSTTTTNN ELGMRSSIEN EHSSHLRGLL NSLANGNNLG QYHNVVEEPK KMSQNNLGLC FGGSDKLTLD FLGVGGMVRN
501: MNNGGGFSQR EQQQQHSMGI TMSPLDPKLE SAQANQHYGT STL

Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)

001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF

Arabidopsis Description

IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.