Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22332 | Soybean | nucleus | 92.08 | 93.25 |
| CDY14910 | Canola | nucleus | 22.71 | 81.95 |
| Bra036013.1-P | Field mustard | nucleus | 25.0 | 75.95 |
| CDY72283 | Canola | nucleus | 29.17 | 74.07 |
| KRH25657 | Soybean | nucleus | 67.08 | 68.37 |
| VIT_12s0028g03030.t01 | Wine grape | nucleus | 59.79 | 67.21 |
| KRH55868 | Soybean | nucleus | 66.04 | 66.88 |
| KRH49655 | Soybean | nucleus | 49.38 | 65.47 |
| KRH67268 | Soybean | nucleus | 31.25 | 57.47 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 38.96 | 52.38 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 37.71 | 49.32 |
| Zm00001d039254_P001 | Maize | nucleus | 36.25 | 49.15 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 35.0 | 47.46 |
| Os01t0242200-01 | Rice | nucleus | 40.0 | 46.27 |
| GSMUA_Achr10P... | Banana | nucleus | 36.04 | 45.89 |
| KRG89168 | Soybean | nucleus, plastid | 32.92 | 45.4 |
| Zm00001d009030_P002 | Maize | nucleus | 41.67 | 44.74 |
| AT5G44160.1 | Thale cress | nucleus | 42.08 | 43.35 |
| KRH15560 | Soybean | nucleus | 36.67 | 43.14 |
| Bra033724.1-P | Field mustard | nucleus | 41.25 | 42.67 |
| CDY22307 | Canola | nucleus | 41.04 | 42.46 |
| CDX94759 | Canola | nucleus | 41.04 | 42.46 |
| CDY18188 | Canola | nucleus | 42.08 | 42.17 |
| CDX89862 | Canola | nucleus | 42.08 | 42.08 |
| Bra015271.1-P | Field mustard | nucleus | 42.08 | 41.91 |
| CDY32514 | Canola | nucleus | 42.08 | 41.22 |
| Bra032541.1-P | Field mustard | nucleus | 42.08 | 41.22 |
| PGSC0003DMT400024272 | Potato | nucleus | 42.5 | 41.21 |
| KRH05443 | Soybean | nucleus | 37.5 | 40.91 |
| AT1G03840.1 | Thale cress | nucleus | 42.5 | 40.32 |
| Solyc07g053570.2.1 | Tomato | nucleus | 41.88 | 40.04 |
| KRH47108 | Soybean | nucleus | 41.04 | 39.56 |
| KRH51873 | Soybean | nucleus | 38.54 | 39.45 |
| TraesCS3B01G195900.1 | Wheat | nucleus | 40.0 | 39.1 |
| TraesCS3A01G170700.1 | Wheat | nucleus | 39.79 | 39.06 |
| EES02157 | Sorghum | nucleus | 38.96 | 38.88 |
| TraesCS3D01G171300.1 | Wheat | nucleus | 39.38 | 38.49 |
| KRG95590 | Soybean | nucleus | 36.88 | 38.48 |
| KRH10015 | Soybean | nucleus | 37.92 | 38.32 |
| KRH76829 | Soybean | nucleus | 41.04 | 38.1 |
| KRH32064 | Soybean | nucleus | 36.67 | 38.01 |
| KRH23306 | Soybean | nucleus | 37.92 | 37.92 |
| KRH71370 | Soybean | nucleus | 36.04 | 37.77 |
| KRH61193 | Soybean | nucleus | 37.08 | 37.63 |
| KRH44134 | Soybean | nucleus | 40.83 | 36.98 |
| KRH08298 | Soybean | nucleus | 39.17 | 36.79 |
| KRH69942 | Soybean | nucleus | 39.79 | 36.38 |
| KRH69941 | Soybean | nucleus, plastid | 39.79 | 36.38 |
| KRH71547 | Soybean | nucleus | 32.92 | 36.32 |
| KRH67672 | Soybean | nucleus | 38.54 | 35.99 |
| KRG95964 | Soybean | nucleus | 38.12 | 35.88 |
| KRH19850 | Soybean | nucleus | 39.17 | 35.81 |
| KRH68150 | Soybean | nucleus | 33.75 | 35.76 |
| KRG92880 | Soybean | nucleus | 39.38 | 35.73 |
| KRG89167 | Soybean | nucleus, plastid | 40.62 | 35.52 |
| KRH49485 | Soybean | nucleus | 40.0 | 35.36 |
| KRG96824 | Soybean | nucleus | 37.29 | 35.31 |
| KRH33908 | Soybean | nucleus, plastid | 39.17 | 35.21 |
| KRH32442 | Soybean | nucleus | 38.75 | 34.96 |
| KRH68532 | Soybean | nucleus | 37.29 | 34.96 |
| KRH49489 | Soybean | nucleus, plastid | 38.54 | 34.71 |
| KRG96409 | Soybean | nucleus | 38.33 | 34.39 |
| KRH26399 | Soybean | nucleus | 35.62 | 34.2 |
| KRH24905 | Soybean | nucleus | 37.71 | 33.46 |
| KRH36039 | Soybean | nucleus | 39.79 | 33.45 |
| KRG90705 | Soybean | nucleus | 39.38 | 33.33 |
| KRH22919 | Soybean | nucleus | 35.21 | 33.2 |
| KRH34792 | Soybean | nucleus | 37.71 | 32.61 |
| KRG91985 | Soybean | nucleus | 37.71 | 32.32 |
| KRG89014 | Soybean | nucleus | 38.33 | 32.06 |
| KRH41885 | Soybean | nucleus | 25.0 | 31.58 |
| KRH60588 | Soybean | nucleus | 26.25 | 31.5 |
| KRH58582 | Soybean | nucleus | 26.25 | 28.64 |
| KRH42485 | Soybean | nucleus | 26.46 | 28.1 |
| KRH38986 | Soybean | nucleus | 27.5 | 27.85 |
| KRH48724 | Soybean | nucleus | 27.29 | 27.12 |
| Os07t0581366-00 | Rice | cytosol, nucleus | 35.42 | 26.81 |
| Zm00001d006682_P001 | Maize | nucleus | 37.71 | 24.39 |
| EER97442 | Sorghum | nucleus | 37.92 | 23.21 |
| Zm00001d021932_P001 | Maize | nucleus | 37.71 | 22.21 |
| TraesCS2B01G218900.1 | Wheat | nucleus | 37.08 | 22.19 |
| TraesCS2A01G188400.2 | Wheat | nucleus | 37.08 | 21.45 |
| TraesCS2D01G199300.3 | Wheat | nucleus | 37.08 | 21.07 |
| HORVU2Hr1G036710.3 | Barley | nucleus | 32.29 | 17.86 |
Protein Annotations
| EntrezGene:100778666 | MapMan:15.5.15 | Gene3D:3.30.160.60 | EMBL:ACUP02007760 | EnsemblPlantsGene:GLYMA_12G207200 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0005488 | InterPro:IPR013087 | UniProt:K7LW49 | EnsemblPlants:KRH26995 | ProteinID:KRH26995 |
| ProteinID:KRH26995.1 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF26 | UniParc:UPI000296B6E3 |
| InterPro:Znf_C2H2_type | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr12:-:36703148..36706735
Molecular Weight (calculated)
53276.4 Da
IEP (calculated)
8.880
GRAVY (calculated)
-0.730
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEKMDDGEI SNVFPHQNPS IAASNNHDQP PILKRKRNLP GNPDPDAEVI TLSPKTLMAT NRFVCEICLK GFQRDQNLQL HRRGHNLPWK LKQRTSKEVR
101: KRVYVCPEKT CVHHHPSRAL GDLTGIKKHF CRKHGEKKWR CEKCSKRYAV QSDWKAHSKT CGTREYKCDC GTIFSRRDSF ITHRAFCDAL AEQTARVNAA
201: SNISNYSIMQ NPVGSDMATH FSSFFKPNSC PDQEPAPGNQ TSNKGLSLWM TQTSQAHHET MVNNNNLHEF YQLGSVTSPT AIYGTSGNPL ASCSNPPPSN
301: YQLNWVLGNK LSTNGSHQEL TSTASLPLVN NIVKDNPNLQ LISVPSLYSS QHQSHQTTSA NMSATALLQK AAQIGTTSSD PSSLFLASIG LKCNSPGQDG
401: NKFCGMYGSS SVLTSHWSEA ENNNNNNNNH NHSGDLSQMP PTKRLHVQNE ESAWGQTRDF LGVGAANHLP PFINQRMDLS
101: KRVYVCPEKT CVHHHPSRAL GDLTGIKKHF CRKHGEKKWR CEKCSKRYAV QSDWKAHSKT CGTREYKCDC GTIFSRRDSF ITHRAFCDAL AEQTARVNAA
201: SNISNYSIMQ NPVGSDMATH FSSFFKPNSC PDQEPAPGNQ TSNKGLSLWM TQTSQAHHET MVNNNNLHEF YQLGSVTSPT AIYGTSGNPL ASCSNPPPSN
301: YQLNWVLGNK LSTNGSHQEL TSTASLPLVN NIVKDNPNLQ LISVPSLYSS QHQSHQTTSA NMSATALLQK AAQIGTTSSD PSSLFLASIG LKCNSPGQDG
401: NKFCGMYGSS SVLTSHWSEA ENNNNNNNNH NHSGDLSQMP PTKRLHVQNE ESAWGQTRDF LGVGAANHLP PFINQRMDLS
001: MTTEDQTISS SGGYVQSSST TDHVDHHHHD QHESLNPPLV KKKRNLPGNP DPEAEVIALS PKTLMATNRF LCEICGKGFQ RDQNLQLHRR GHNLPWKLKQ
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
101: RTSKEVRKRV YVCPEKSCVH HHPTRALGDL TGIKKHFCRK HGEKKWKCEK CAKRYAVQSD WKAHSKTCGT REYRCDCGTI FSRRDSFITH RAFCDALAEE
201: TARLNAASHL KSFAATAGSN LNYHYLMGTL IPSPSLPQPP SFPFGPPQPQ HHHHHQFPIT TNNFDHQDVM KPASTLSLWS GGNINHHQQV TIEDRMAPQP
301: HSPQEDYNWV FGNANNHGEL ITTSDSLITH DNNINIVQSK ENANGATSLS VPSLFSSVDQ ITQDANAASV AVANMSATAL LQKAAQMGAT SSTSPTTTIT
401: TDQSAYLQSF ASKSNQIVED GGSDRFFASF GSNSVELMSN NNNGLHEIGN PRNGVTVVSG MGELQNYPWK RRRVDIGNAG GGGQTRDFLG VGVQTICHSS
501: SINGWI
Arabidopsis Description
MGPUncharacterized protein At1g03840 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SUS5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.