Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26995 | Soybean | nucleus | 93.25 | 92.08 |
| CDY14910 | Canola | nucleus | 23.21 | 82.71 |
| Bra036013.1-P | Field mustard | nucleus | 25.53 | 76.58 |
| CDY72283 | Canola | nucleus | 29.75 | 74.6 |
| KRH25657 | Soybean | nucleus | 68.99 | 69.43 |
| VIT_12s0028g03030.t01 | Wine grape | nucleus | 61.81 | 68.62 |
| KRH55868 | Soybean | nucleus | 68.57 | 68.57 |
| KRH49655 | Soybean | nucleus | 50.84 | 66.57 |
| KRH67268 | Soybean | nucleus | 31.65 | 57.47 |
| GSMUA_Achr7P14780_001 | Banana | nucleus | 40.08 | 53.22 |
| GSMUA_Achr9P06650_001 | Banana | nucleus | 38.82 | 50.14 |
| Zm00001d039254_P001 | Maize | nucleus | 36.92 | 49.44 |
| GSMUA_Achr6P27030_001 | Banana | nucleus | 36.08 | 48.31 |
| GSMUA_Achr10P... | Banana | nucleus | 37.76 | 47.48 |
| Os01t0242200-01 | Rice | nucleus | 41.14 | 46.99 |
| KRG89168 | Soybean | nucleus, plastid | 33.54 | 45.69 |
| Zm00001d009030_P002 | Maize | nucleus | 42.62 | 45.19 |
| KRH15560 | Soybean | nucleus | 37.34 | 43.38 |
| AT5G44160.1 | Thale cress | nucleus | 42.62 | 43.35 |
| Bra033724.1-P | Field mustard | nucleus | 42.41 | 43.32 |
| CDY22307 | Canola | nucleus | 42.19 | 43.1 |
| CDX94759 | Canola | nucleus | 42.19 | 43.1 |
| CDY18188 | Canola | nucleus | 43.25 | 42.8 |
| CDX89862 | Canola | nucleus | 43.25 | 42.71 |
| Bra015271.1-P | Field mustard | nucleus | 43.25 | 42.53 |
| CDY32514 | Canola | nucleus | 43.04 | 41.63 |
| Bra032541.1-P | Field mustard | nucleus | 43.04 | 41.63 |
| KRH05443 | Soybean | nucleus | 38.4 | 41.36 |
| PGSC0003DMT400024272 | Potato | nucleus | 43.04 | 41.21 |
| AT1G03840.1 | Thale cress | nucleus | 43.46 | 40.71 |
| Solyc07g053570.2.1 | Tomato | nucleus | 42.83 | 40.44 |
| KRH47108 | Soybean | nucleus | 41.98 | 39.96 |
| KRH10015 | Soybean | nucleus | 39.45 | 39.37 |
| TraesCS3B01G195900.1 | Wheat | nucleus | 40.72 | 39.31 |
| EES02157 | Sorghum | nucleus | 39.87 | 39.29 |
| TraesCS3A01G170700.1 | Wheat | nucleus | 40.51 | 39.26 |
| KRH51873 | Soybean | nucleus | 38.82 | 39.23 |
| KRH23306 | Soybean | nucleus | 39.66 | 39.17 |
| TraesCS3D01G171300.1 | Wheat | nucleus | 40.08 | 38.7 |
| KRG95590 | Soybean | nucleus | 37.34 | 38.48 |
| KRH76829 | Soybean | nucleus | 41.77 | 38.3 |
| KRH32064 | Soybean | nucleus | 37.13 | 38.01 |
| KRH71370 | Soybean | nucleus | 36.5 | 37.77 |
| KRH08298 | Soybean | nucleus | 40.51 | 37.57 |
| KRH61193 | Soybean | nucleus | 37.34 | 37.42 |
| KRH44134 | Soybean | nucleus | 41.77 | 37.36 |
| KRH69942 | Soybean | nucleus | 41.14 | 37.14 |
| KRH69941 | Soybean | nucleus, plastid | 41.14 | 37.14 |
| KRH19850 | Soybean | nucleus | 40.93 | 36.95 |
| KRG92880 | Soybean | nucleus | 41.14 | 36.86 |
| KRH71547 | Soybean | nucleus | 33.76 | 36.78 |
| KRH67672 | Soybean | nucleus | 39.87 | 36.77 |
| KRH68150 | Soybean | nucleus | 35.02 | 36.64 |
| KRG95964 | Soybean | nucleus | 39.24 | 36.47 |
| KRH33908 | Soybean | nucleus, plastid | 40.93 | 36.33 |
| KRH32442 | Soybean | nucleus | 40.51 | 36.09 |
| KRG96824 | Soybean | nucleus | 38.4 | 35.9 |
| KRH68532 | Soybean | nucleus | 38.61 | 35.74 |
| KRH49489 | Soybean | nucleus, plastid | 39.87 | 35.46 |
| KRH49485 | Soybean | nucleus | 40.51 | 35.36 |
| KRG89167 | Soybean | nucleus, plastid | 40.72 | 35.15 |
| KRG96409 | Soybean | nucleus | 39.66 | 35.14 |
| KRH26399 | Soybean | nucleus | 36.5 | 34.6 |
| KRH24905 | Soybean | nucleus | 38.82 | 34.01 |
| KRH22919 | Soybean | nucleus | 36.5 | 33.99 |
| KRG90705 | Soybean | nucleus | 40.51 | 33.86 |
| KRH36039 | Soybean | nucleus | 40.51 | 33.63 |
| KRH34792 | Soybean | nucleus | 38.4 | 32.79 |
| KRG89014 | Soybean | nucleus | 39.66 | 32.75 |
| KRG91985 | Soybean | nucleus | 38.19 | 32.32 |
| KRH41885 | Soybean | nucleus | 24.89 | 31.05 |
| KRH60588 | Soybean | nucleus | 25.95 | 30.75 |
| KRH58582 | Soybean | nucleus | 26.16 | 28.18 |
| KRH42485 | Soybean | nucleus | 26.37 | 27.65 |
| KRH38986 | Soybean | nucleus | 27.22 | 27.22 |
| Os07t0581366-00 | Rice | cytosol, nucleus | 35.87 | 26.81 |
| KRH48724 | Soybean | nucleus | 27.0 | 26.5 |
| Zm00001d006682_P001 | Maize | nucleus | 38.4 | 24.53 |
| EER97442 | Sorghum | nucleus | 38.19 | 23.09 |
| Zm00001d021932_P001 | Maize | nucleus | 38.19 | 22.21 |
| TraesCS2B01G218900.1 | Wheat | nucleus | 37.34 | 22.07 |
| TraesCS2A01G188400.2 | Wheat | nucleus | 37.34 | 21.33 |
| TraesCS2D01G199300.3 | Wheat | nucleus | 37.34 | 20.95 |
| HORVU2Hr1G036710.3 | Barley | nucleus | 32.49 | 17.74 |
Protein Annotations
| EMBL:ACUP02008406 | EnsemblPlants:KRH22332 | EnsemblPlantsGene:GLYMA_13G293800 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF26 |
| PFscan:PS50157 | ProteinID:KRH22332 | ProteinID:KRH22332.1 | ScanProsite:PS00028 | SEG:seg | SUPFAM:SSF57667 |
| UniParc:UPI000296679D | UniProt:I1M3P4 | MapMan:15.5.15 | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:39343173..39346777
Molecular Weight (calculated)
52320.3 Da
IEP (calculated)
9.090
GRAVY (calculated)
-0.734
Length
474 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEKMDDGEI SNAFPHQNPS TAASNNQPPT LKRKRNLPGN PDPEAEVIVL SPKTLMATNR FVCEICLKGF QRDQNLQLHR RGHNLPWKLK QRTSKEVRKR
101: VYVCPEKTCV HHHPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYKCDCGT IFSRRDSFIT HRAFCDALAE ETARVNAASN
201: ISNYSIMQNP LGPNMTTQFS SFFKPNSCSD QEPAPGNQTS NKGLSLWMTQ TSQAHEAMAN NNNLHEFHQL GSVTSPTAIY GTSGNPLASC SNPPPSNYQL
301: NWVFGNKLSS NGSHQELTST ASLPLVNNIV KDNPNLQLIS VPSLYSSQHQ SHQASSANMS ATALLQKAAQ VGTTSSDPSS LFHGSIGLKC NSPGQDGNKF
401: CGMYGSSSVL TTSHHGSEAE NNNNNYSGDL SQIPPTKRRH VQNEESAWGQ TRDFLGVGGA NHLPPFINQR MDLI
101: VYVCPEKTCV HHHPSRALGD LTGIKKHFCR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYKCDCGT IFSRRDSFIT HRAFCDALAE ETARVNAASN
201: ISNYSIMQNP LGPNMTTQFS SFFKPNSCSD QEPAPGNQTS NKGLSLWMTQ TSQAHEAMAN NNNLHEFHQL GSVTSPTAIY GTSGNPLASC SNPPPSNYQL
301: NWVFGNKLSS NGSHQELTST ASLPLVNNIV KDNPNLQLIS VPSLYSSQHQ SHQASSANMS ATALLQKAAQ VGTTSSDPSS LFHGSIGLKC NSPGQDGNKF
401: CGMYGSSSVL TTSHHGSEAE NNNNNYSGDL SQIPPTKRRH VQNEESAWGQ TRDFLGVGGA NHLPPFINQR MDLI
001: MTSEVLQTIS SGSGFAQPQS SSTLDHDESL INPPLVKKKR NLPGNPDPEA EVIALSPTTL MATNRFLCEV CGKGFQRDQN LQLHRRGHNL PWKLKQRTSK
101: EVRKRVYVCP EKTCVHHHSS RALGDLTGIK KHFCRKHGEK KWTCEKCAKR YAVQSDWKAH SKTCGTREYR CDCGTIFSRR DSFITHRAFC DALAEETAKI
201: NAVSHLNGLA AAGAPGSVNL NYQYLMGTFI PPLQPFVPQP QTNPNHHHQH FQPPTSSSLS LWMGQDIAPP QPQPDYDWVF GNAKAASACI DNNNTHDEQI
301: TQNANASLTT TTTLSAPSLF SSDQPQNANA NSNVNMSATA LLQKAAEIGA TSTTTAATND PSTFLQSFPL KSTDQTTSYD SGEKFFALFG SNNNIGLMSR
401: SHDHQEIENA RNDVTVASAL DELQNYPWKR RRVDGGGEVG GGGQTRDFLG VGVQTLCHPS SINGWI
101: EVRKRVYVCP EKTCVHHHSS RALGDLTGIK KHFCRKHGEK KWTCEKCAKR YAVQSDWKAH SKTCGTREYR CDCGTIFSRR DSFITHRAFC DALAEETAKI
201: NAVSHLNGLA AAGAPGSVNL NYQYLMGTFI PPLQPFVPQP QTNPNHHHQH FQPPTSSSLS LWMGQDIAPP QPQPDYDWVF GNAKAASACI DNNNTHDEQI
301: TQNANASLTT TTTLSAPSLF SSDQPQNANA NSNVNMSATA LLQKAAEIGA TSTTTAATND PSTFLQSFPL KSTDQTTSYD SGEKFFALFG SNNNIGLMSR
401: SHDHQEIENA RNDVTVASAL DELQNYPWKR RRVDGGGEVG GGGQTRDFLG VGVQTLCHPS SINGWI
Arabidopsis Description
NUCZinc finger protein NUTCRACKER [Source:UniProtKB/Swiss-Prot;Acc:Q9FFH3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.