CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG95964
KRH00551
KRH04424
KRH22332
KRH26995
KRH28353
KRH40615
KRH58109
KRH67672
KRH77129

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G03150.1	KRH22332	AT1G03840.1	17785527
AT5G03150.1	KRH26995	AT1G03840.1	17785527
AT5G03150.1	KRH00551	AT3G54220.1	17785527
AT5G03150.1	KRH40615	AT3G54220.1	17785527
AT5G03150.1	KRH04424	AT4G37650.1	17785527
AT5G03150.1	KRH28353	AT4G37650.1	17785527
AT5G03150.1	KRH58109	AT4G37650.1	17785527
AT5G03150.1	KRH77129	AT4G37650.1	17785527
AT5G03150.1	KRG95964	AT5G03150.1	17785527
AT5G03150.1	KRH67672	AT5G03150.1	17785527

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95964	Soybean	nucleus	91.25	91.96
KRH19850	Soybean	nucleus	70.04	68.57
KRH32442	Soybean	nucleus	68.68	66.35
KRH67268	Soybean	nucleus	29.38	57.85
PGSC0003DMT400004390	Potato	nucleus	49.22	55.48
Solyc09g007550.2.1	Tomato	nucleus, plastid	48.64	54.47
CDY11241	Canola	nucleus	51.17	52.29
Bra005741.1-P	Field mustard	nucleus	51.17	52.18
AT5G03150.1	Thale cress	nucleus	50.97	52.09
CDX80854	Canola	nucleus	51.17	52.08
CDY44344	Canola	nucleus	50.0	51.4
CDY10404	Canola	nucleus	50.58	51.28
Bra009549.1-P	Field mustard	nucleus	51.17	50.97
CDX70328	Canola	nucleus	50.39	50.39
KRG89168	Soybean	nucleus, plastid	31.32	46.26
Solyc10g084180.1.1	Tomato	nucleus	42.22	44.02
PGSC0003DMT400027159	Potato	nucleus	42.02	43.9
KRH15560	Soybean	nucleus	33.46	42.16
KRH25657	Soybean	nucleus	37.55	40.98
GSMUA_Achr7P22720_001	Banana	mitochondrion	22.18	40.57
KRH49655	Soybean	nucleus	28.4	40.33
KRH55868	Soybean	nucleus	36.97	40.08
KRH22332	Soybean	nucleus	36.77	39.87
KRH32064	Soybean	nucleus	35.8	39.74
KRH71370	Soybean	nucleus	35.41	39.74
KRH10015	Soybean	nucleus	36.58	39.58
KRG95590	Soybean	nucleus	35.21	39.35
KRH05443	Soybean	nucleus	33.66	39.32
KRH47108	Soybean	nucleus	37.94	39.16
KRH51873	Soybean	nucleus	35.21	38.59
KRH26995	Soybean	nucleus	35.99	38.54
KRH23306	Soybean	nucleus	35.99	38.54
KRG96409	Soybean	nucleus	39.88	38.32
PGSC0003DMT400008694	Potato	nucleus, plastid	39.3	38.26
Solyc06g075250.2.1	Tomato	nucleus, plastid	39.3	38.26
KRH71547	Soybean	nucleus	32.1	37.93
KRH68150	Soybean	nucleus	33.07	37.53
KRH76829	Soybean	nucleus	37.55	37.33
KRH61193	Soybean	nucleus	34.24	37.21
KRH49489	Soybean	nucleus, plastid	38.52	37.15
KRH44134	Soybean	nucleus	38.13	36.98
KRH08298	Soybean	nucleus	36.19	36.4
KRH69942	Soybean	nucleus	36.19	35.43
KRH69941	Soybean	nucleus, plastid	36.19	35.43
KRH34792	Soybean	nucleus	38.13	35.32
KRH24905	Soybean	nucleus	37.16	35.3
KRG90705	Soybean	nucleus	38.72	35.1
KRG89167	Soybean	nucleus, plastid	37.35	34.97
KRH36039	Soybean	nucleus	38.72	34.85
KRH26399	Soybean	nucleus	33.85	34.8
KRH49485	Soybean	nucleus	36.58	34.62
KRG89014	Soybean	nucleus	38.13	34.15
KRG91985	Soybean	nucleus	37.16	34.11
KRH22919	Soybean	nucleus	33.27	33.6
KRG96824	Soybean	nucleus	33.07	33.53
KRH33908	Soybean	nucleus, plastid	34.82	33.52
KRG92880	Soybean	nucleus	34.24	33.27
KRH68532	Soybean	nucleus	32.88	33.01
KRH41885	Soybean	nucleus	21.98	29.74
KRH60588	Soybean	nucleus	22.18	28.5
KRH58582	Soybean	nucleus	22.18	25.91
KRH38986	Soybean	nucleus	23.74	25.74
KRH42485	Soybean	nucleus	22.37	25.44
KRH48724	Soybean	nucleus	23.74	25.26

Protein Annotations

EntrezGene:100812495	MapMan:15.5.15	Gene3D:3.30.160.60	EMBL:ACUP02002069	EnsemblPlantsGene:GLYMA_03G179700	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0046872	UniProt:I1JPL1	InterPro:IPR013087	InterPro:JKD-like
EnsemblPlants:KRH67672	ProteinID:KRH67672	ProteinID:KRH67672.1	ProteinID:KRH67673.1	PFAM:PF12171	ScanProsite:PS00028
PFscan:PS50157	PANTHER:PTHR10593	PANTHER:PTHR10593:SF42	SMART:SM00355	SUPFAM:SSF57667	UniParc:UPI00023C0E3B
InterPro:Znf_C2H2_jaz	InterPro:Znf_C2H2_sf	InterPro:Znf_C2H2_type	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:39192216..39195235

Molecular Weight (calculated)

55821.4 Da

IEP (calculated)

9.589

GRAVY (calculated)

-0.640

Length

514 amino acids

Sequence
(BLAST)

001: MQMIPGDPFS LSTSLPAGLP NEQSTNTNPN PNPPPPNKKK RNLPGTPDPD AEVIALSPKT LMATNRFICE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRSN
101: KEVRKKVYIC PEKTCVHHDA ARALGDLTGI KKHYSRKHGE KKWKCEKCSK KYAVQSDWKA HTKTCGTREY KCDCGNLFSR KDSFITHRAF CDALADESSR
201: LTSVASTSLN FKSEDATMIN TQASLSTRGL ITDHGMQNVS QFGPHGFRLM NMGTDQQRPN LSLWLNQGNH HINNPLDVAL SSSSSGLPEV VHMAQANINN
301: NALIGSSSVF SNFGMPASSN SSNPNLMGKK GDGGASDLAS MYSESQNKNS NSTSPMSATA LLQKAAQMGS TRSTNPSIFS GSFGVMSSSS TQSTSLNSNI
401: ANQSCDQLNQ AFQNFNATSS SSATMLGSST NFSSLTHSSN GFDQFMMQNN VEPTQLKLHH PGSNSVEHNL TRDFLGVSGN GGGQVHHAFL PQELAKFASL
501: GSSMGLNQFT VGHQ

Best Arabidopsis Sequence Match ( AT5G03150.1 )
(BLAST)

001: MQMIPGDPFS ISSSMGGFVH QETHLHHLQQ QIPDLNPNSN PNPNAKPNSS SAKKKRNQPG TPDPDADVIA LSPTTLMATN RFVCEICNKG FQRDQNLQLH
101: RRGHNLPWKL KQRSKQEVIK KKVYICPIKT CVHHDASRAL GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTREYKCDC GTLFSRKDSF
201: ITHRAFCDAL TEEGARMSSL SNNNPVISTT NLNFGNESNV MNNPNLPHGF VHRGVHHPDI NAAISQFGLG FGHDLSAMHA QGLSEMVQMA STGNHHLFPS
301: SSSSLPDFSG HHQFQIPMTS TNPSLTLSSS STSQQTSASL QHQTLKDSSF SPLFSSSSEN KQNKPLSPMS ATALLQKAAQ MGSTRSNSST APSFFAGPTM
401: TSSSATASPP PRSSSPMMIQ QQLNNFNTNV LRENHNRAPP PLSGVSTSSV DNNPFQSNRS GLNPAQQMGL TRDFLGVSNE HHPHQTGRRP FLPQELARFA
501: PLG

Arabidopsis Description

JKDZinc finger protein JACKDAW [Source:UniProtKB/Swiss-Prot;Acc:Q700D2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.