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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:plastid
TargetP:plastid
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRG90705 Soybean nucleus 92.82 93.47
CDY04118 Canola nucleus 19.44 93.28
CDY09390 Canola nucleus 19.09 91.6
KRG89168 Soybean nucleus, plastid 46.94 77.01
CDY53540 Canola nucleus 24.17 71.13
CDY04117 Canola nucleus 26.44 70.56
KRH49489 Soybean nucleus, plastid 62.7 67.17
GSMUA_AchrUn_... Banana mitochondrion, nucleus 39.4 61.81
VIT_01s0010g02100.t01 Wine grape nucleus 60.6 60.49
KRH67268 Soybean nucleus 25.92 56.7
GSMUA_Achr9P23870_001 Banana nucleus 41.68 54.84
GSMUA_Achr5P11770_001 Banana nucleus, plastid 38.18 54.77
GSMUA_Achr4P11810_001 Banana mitochondrion, nucleus 46.06 53.67
KRH49485 Soybean nucleus 50.96 53.59
KRH34792 Soybean nucleus 51.31 52.79
GSMUA_Achr3P13990_001 Banana nucleus 39.23 52.58
KRG89167 Soybean nucleus, plastid 50.44 52.46
KRG91985 Soybean nucleus 51.31 52.32
GSMUA_Achr1P07110_001 Banana nucleus 44.13 51.85
GSMUA_Achr4P04310_001 Banana nucleus 42.56 51.37
GSMUA_AchrUn_... Banana mitochondrion, nucleus 43.26 50.51
GSMUA_Achr10P... Banana nucleus 41.68 49.69
GSMUA_Achr1P17940_001 Banana nucleus 40.63 49.68
VIT_01s0010g02090.t01 Wine grape extracellular, vacuole 55.69 48.11
PGSC0003DMT400075837 Potato nucleus 43.61 48.07
Solyc04g008500.2.1 Tomato nucleus 42.38 46.81
GSMUA_Achr1P02080_001 Banana nucleus 44.13 46.07
Os09t0555700-02 Rice nucleus 42.03 44.86
Zm00001d021403_P001 Maize nucleus 37.83 44.63
TraesCS5A01G356100.1 Wheat nucleus, plastid 42.56 44.59
TraesCS5B01G358600.1 Wheat nucleus, plastid 42.56 44.51
CDY45271 Canola nucleus 32.22 44.23
TraesCS5D01G364900.1 Wheat nucleus, plastid 42.21 44.06
KRH15560 Soybean nucleus 30.82 43.14
KRH51873 Soybean nucleus 35.38 43.07
OQU89911 Sorghum nucleus, plastid 40.11 42.96
Bra026204.1-P Field mustard nucleus, plastid 33.8 42.89
CDY45270 Canola nucleus 33.8 42.89
CDY59418 Canola nucleus 31.0 42.86
KXG25416 Sorghum nucleus 41.51 42.86
GSMUA_Achr11P... Banana nucleus 39.93 42.78
KRH47108 Soybean nucleus 37.3 42.77
GSMUA_Achr4P05240_001 Banana nucleus 36.95 42.2
CDY03081 Canola nucleus 38.7 42.18
Os08t0554400-02 Rice nucleus 40.46 42.15
CDY17615 Canola nucleus 38.88 42.13
KRH61193 Soybean nucleus 34.68 41.86
KRH10015 Soybean nucleus 34.5 41.47
TraesCS6B01G271000.1 Wheat nucleus 41.68 41.32
GSMUA_Achr11P... Banana nucleus 36.95 41.29
KRH32064 Soybean nucleus 33.45 41.25
KRH23306 Soybean nucleus 34.68 41.25
TraesCS6A01G254500.1 Wheat nucleus 41.68 41.18
Bra026203.1-P Field mustard nucleus, plastid 33.45 41.16
CDY09391 Canola nucleus 40.81 41.09
TraesCS6D01G235800.1 Wheat nucleus 41.51 41.0
KRH05443 Soybean nucleus 31.52 40.91
CDY15811 Canola nucleus 40.63 40.85
KRH71370 Soybean nucleus 32.75 40.83
KRH76829 Soybean nucleus 36.95 40.81
Bra026819.1-P Field mustard nucleus 33.27 40.69
CDY17440 Canola nucleus 33.98 40.59
KRH44134 Soybean nucleus 37.65 40.57
KRH22332 Soybean nucleus 33.63 40.51
KRH25657 Soybean nucleus 33.27 40.34
CDX81653 Canola nucleus 32.92 40.26
EES11271 Sorghum nucleus 42.21 40.23
Bra024834.1-P Field mustard nucleus, plastid 38.88 40.22
TraesCS2B01G421100.1 Wheat nucleus 43.08 40.2
KRH55868 Soybean nucleus 33.27 40.08
KRH49655 Soybean nucleus 25.39 40.06
Zm00001d017560_P001 Maize nucleus 40.81 40.03
KRG95590 Soybean nucleus 32.22 40.0
KRH26995 Soybean nucleus 33.45 39.79
KRG92880 Soybean nucleus 36.78 39.7
Bra026617.1-P Field mustard nucleus 40.98 39.66
GSMUA_Achr11P... Banana nucleus 39.23 39.58
Zm00001d026113_P006 Maize nucleus 41.51 39.57
AT2G02080.3 Thale cress nucleus, plastid 35.73 39.53
CDY15814 Canola nucleus 32.75 39.53
KRH08298 Soybean nucleus 35.38 39.53
KRH69941 Soybean nucleus, plastid 36.08 39.24
KRH69942 Soybean nucleus 36.08 39.24
KXG31026 Sorghum nucleus 40.81 39.16
KRH33908 Soybean nucleus, plastid 36.6 39.14
Zm00001d031992_P001 Maize nucleus 41.33 39.01
KRH67672 Soybean nucleus 34.85 38.72
Os04t0566400-02 Rice nucleus 41.51 38.66
Bra040974.1-P Field mustard nucleus, plastid 39.58 38.63
KRG95964 Soybean nucleus 34.5 38.63
Bra026616.1-P Field mustard nucleus 34.5 38.55
AT1G14580.3 Thale cress nucleus 32.4 38.46
CDY17614 Canola nucleus, plastid 34.5 38.4
Os02t0672100-01 Rice nucleus 41.33 38.37
Bra024833.1-P Field mustard plastid 34.33 38.21
CDY03080 Canola nucleus, plastid 34.5 38.18
AT2G02070.2 Thale cress nucleus 39.93 37.87
KRH19850 Soybean nucleus 34.68 37.71
KRH32442 Soybean nucleus 34.85 37.41
Bra023223.1-P Field mustard plastid 31.35 37.29
Zm00001d002654_P003 Maize nucleus 41.33 37.28
TraesCS2D01G400300.2 Wheat nucleus 43.08 37.16
TraesCS2A01G403200.2 Wheat nucleus 42.91 36.95
KXG36163 Sorghum nucleus 37.3 36.6
KRH71547 Soybean nucleus 27.85 36.55
KRH68532 Soybean nucleus 32.75 36.52
KRG96824 Soybean nucleus 32.22 36.29
KRH68150 Soybean nucleus 28.72 36.2
KRG96409 Soybean nucleus 33.63 35.89
CDY12268 Canola nucleus 27.85 35.65
KRH26399 Soybean nucleus 31.17 35.6
KRH22919 Soybean nucleus 31.52 35.36
KRH24905 Soybean nucleus 33.27 35.12
Zm00001d006319_P001 Maize nucleus 33.8 34.53
CDY68983 Canola nucleus 23.29 34.02
KRG89014 Soybean nucleus 33.8 33.62
KRH41885 Soybean nucleus 20.49 30.79
KRH60588 Soybean nucleus 21.37 30.5
KRH42485 Soybean nucleus 22.77 28.76
KRH58582 Soybean nucleus 22.07 28.64
KRH38986 Soybean nucleus 23.12 27.85
KRH48724 Soybean nucleus 23.29 27.54
Protein Annotations
EntrezGene:100786121MapMan:15.5.15Gene3D:3.30.160.60EMBL:ACUP02006718EnsemblPlantsGene:GLYMA_10G280000GO:GO:0003674
GO:GO:0003676GO:GO:0005488GO:GO:0046872UniProt:I1LF27InterPro:IPR013087EnsemblPlants:KRH36039
ProteinID:KRH36039ProteinID:KRH36039.1PFAM:PF12171ScanProsite:PS00028PFscan:PS50157PANTHER:PTHR10593
PANTHER:PTHR10593:SF50SMART:SM00355SUPFAM:SSF57667UniParc:UPI000233D3AEInterPro:Znf_C2H2_jazInterPro:Znf_C2H2_sf
InterPro:Znf_C2H2_typeSEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:50139642..50146154
Molecular Weight (calculated)
61734.1 Da
IEP (calculated)
9.574
GRAVY (calculated)
-0.853
Length
571 amino acids
Sequence
(BLAST)
001: MAASSSSASL FGFREEDQQN QMKQQHSLTP SPSTTPAAPP PQKKKRNQPG TPYPDAEVIA LSPKTLMATN RFICEVCNKG FQREQNLQLH RRGHNLPWKL
101: KQKTTKEPKR KVYLCPEPTC VHHDPSRALG DLTGIKKHYS RKHGEKKWKC DKCSKKYAVQ SDWKAHSKTC GTREYRCDCG TLFSRRDSFI THRAFCDALA
201: QESARQPPSL SGGGIGSHLY GSTTNMALNL SQVGSQIQDP SNAQPTELLR LGATSGRTGH FDHILGSPFR PSNQQQQPFF MSEQPNQTYH HPDQNKPFQQ
301: GLMQQLSDHH HLNNNNSPFN LPFLSSNTAN ASFSEHFNNA NGGGNNNNNN EGTNYFATSS APSLFSNSAN ANANALSHMS ATALLQKAAQ MGATSSNGTA
401: SLLKSFGSAS SSSGGGSKSE QQHRVPPLVN AANYVGGMFG GNHVNEQQSN SNLQDLMNSF AVGGNSSIFE AGGFEAYDHS NNNNNRDPKV LAMSGSNSVG
501: GSDRLTRDFL GVGQIVRGMS GSGGVAQREQ QQQHGFNLSS LEAERNNNNN NSNNAAPSSG QAFGGGGGNF Q
Best Arabidopsis Sequence Match ( AT2G02070.1 )
(BLAST)
001: MAASSSSAAS FFGVRQDDQS HLLPPNSSAA APPPPPPHHQ APLPPLEAPP QKKKRNQPRT PNSDAEVIAL SPKTLMATNR FICEVCNKGF QREQNLQLHR
101: RGHNLPWKLK QKSTKEVKRK VYLCPEPSCV HHDPSRALGD LTGIKKHYYR KHGEKKWKCD KCSKRYAVQS DWKAHSKTCG TKEYRCDCGT LFSRRDSFIT
201: HRAFCDALAQ ESARHPTSLT SLPSHHFPYG QNTNNSNNNA SSMILGLSHM GAPQNLDHQP GDVLRLGSGG GGGGAASRSS SDLIAANASG YFMQEQNPSF
301: HDQQDHHHHH QQGFLAGNNN IKQSPMSFQQ NLMQFSHDNH NSAPSNVFNL SFLSGNNGVT SATSNPNAAA AAAVSSGNLM ISNHYDGENA VGGGGEGSTG
401: LFPNNLMSSA DRISSGSVPS LFSSSMQSPN SAPHMSATAL LQKAAQMGST SSNNNNGSNT NNNNNASSIL RSFGSGIYGE NESNLQDLMN SFSNPGATGN
501: VNGVDSPFGS YGGVNKGLSA DKQSMTRDFL GVGQIVKSMS GSGGFQQQQQ QQQQQQQQQQ HGNSRERVGS SSDSADRSSM NVNTGGGPAS TSPPYGIHHA
601: SF
Arabidopsis Description
IDD5Protein indeterminate-domain 5, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUL3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.