Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09390 | Canola | nucleus | 15.38 | 72.27 |
| CDY04118 | Canola | nucleus | 15.38 | 72.27 |
| KXG36163 | Sorghum | nucleus | 63.51 | 61.0 |
| CDY53540 | Canola | nucleus | 19.14 | 55.15 |
| CDY04117 | Canola | nucleus | 19.68 | 51.4 |
| Zm00001d021403_P001 | Maize | nucleus | 40.43 | 46.69 |
| GSMUA_AchrUn_... | Banana | mitochondrion, nucleus | 29.34 | 45.05 |
| KRG89168 | Soybean | nucleus, plastid | 27.91 | 44.83 |
| Zm00001d039254_P001 | Maize | nucleus | 25.76 | 40.68 |
| GSMUA_Achr4P04310_001 | Banana | nucleus | 32.92 | 38.9 |
| VIT_01s0010g02100.t01 | Wine grape | nucleus | 37.75 | 36.89 |
| Solyc04g008500.2.1 | Tomato | nucleus | 32.92 | 35.59 |
| KRG91985 | Soybean | nucleus | 35.42 | 35.36 |
| PGSC0003DMT400075837 | Potato | nucleus | 32.74 | 35.33 |
| KRH49485 | Soybean | nucleus | 34.17 | 35.17 |
| CDY45271 | Canola | nucleus | 26.12 | 35.1 |
| KRH34792 | Soybean | nucleus | 34.7 | 34.95 |
| Bra026204.1-P | Field mustard | nucleus, plastid | 27.91 | 34.67 |
| KRG89167 | Soybean | nucleus, plastid | 33.99 | 34.61 |
| KRH49489 | Soybean | nucleus, plastid | 32.92 | 34.52 |
| CDY45270 | Canola | nucleus | 27.73 | 34.44 |
| KRG90705 | Soybean | nucleus | 34.88 | 34.39 |
| Zm00001d008842_P001 | Maize | nucleus | 28.62 | 34.26 |
| Zm00001d009030_P002 | Maize | nucleus | 27.19 | 34.0 |
| KRH36039 | Soybean | nucleus | 34.53 | 33.8 |
| GSMUA_Achr11P... | Banana | nucleus | 32.02 | 33.58 |
| GSMUA_Achr11P... | Banana | nucleus | 30.41 | 33.27 |
| CDY59418 | Canola | nucleus | 24.33 | 32.93 |
| Zm00001d039467_P001 | Maize | nucleus | 29.16 | 32.8 |
| Zm00001d031992_P001 | Maize | nucleus | 35.42 | 32.73 |
| Zm00001d011223_P002 | Maize | nucleus | 27.37 | 32.69 |
| CDY17440 | Canola | nucleus | 27.73 | 32.43 |
| Zm00001d017560_P001 | Maize | nucleus | 33.45 | 32.13 |
| Zm00001d044261_P001 | Maize | nucleus | 27.55 | 32.08 |
| Bra026203.1-P | Field mustard | nucleus, plastid | 26.48 | 31.9 |
| Zm00001d026113_P006 | Maize | nucleus | 34.17 | 31.89 |
| AT2G02080.3 | Thale cress | nucleus, plastid | 29.34 | 31.78 |
| CDY15814 | Canola | nucleus | 26.48 | 31.29 |
| Zm00001d032922_P001 | Maize | nucleus | 24.33 | 31.19 |
| Bra026616.1-P | Field mustard | nucleus | 28.44 | 31.12 |
| VIT_01s0010g02090.t01 | Wine grape | extracellular, vacuole | 36.67 | 31.01 |
| CDY17614 | Canola | nucleus, plastid | 28.26 | 30.8 |
| Bra024833.1-P | Field mustard | plastid | 28.09 | 30.6 |
| Zm00001d028139_P001 | Maize | nucleus | 29.34 | 30.43 |
| CDY03080 | Canola | nucleus, plastid | 27.91 | 30.23 |
| Bra026819.1-P | Field mustard | nucleus | 25.22 | 30.19 |
| CDX81653 | Canola | nucleus | 25.22 | 30.19 |
| Zm00001d002654_P003 | Maize | nucleus | 34.17 | 30.17 |
| Zm00001d016632_P001 | Maize | nucleus | 27.19 | 29.92 |
| Zm00001d042202_P001 | Maize | nucleus | 27.73 | 29.52 |
| AT1G14580.3 | Thale cress | nucleus | 25.04 | 29.11 |
| Bra023223.1-P | Field mustard | plastid | 24.87 | 28.96 |
| CDY03081 | Canola | nucleus | 26.65 | 28.44 |
| CDY17615 | Canola | nucleus | 26.65 | 28.27 |
| Zm00001d005871_P002 | Maize | nucleus | 22.18 | 28.12 |
| CDY15811 | Canola | nucleus | 27.73 | 27.29 |
| CDY12268 | Canola | nucleus | 21.65 | 27.13 |
| Bra024834.1-P | Field mustard | nucleus, plastid | 26.65 | 26.99 |
| CDY09391 | Canola | nucleus | 27.37 | 26.98 |
| Bra040974.1-P | Field mustard | nucleus, plastid | 27.19 | 25.98 |
| Bra026617.1-P | Field mustard | nucleus | 27.37 | 25.93 |
| AT2G02070.2 | Thale cress | nucleus | 27.91 | 25.91 |
| Zm00001d020683_P001 | Maize | nucleus | 22.18 | 24.95 |
| CDY68983 | Canola | nucleus | 17.35 | 24.81 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 20.04 | 24.78 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 19.86 | 24.78 |
| Zm00001d031759_P001 | Maize | nucleus | 22.54 | 24.32 |
| Zm00001d006682_P001 | Maize | nucleus | 29.7 | 22.37 |
| Zm00001d021932_P001 | Maize | nucleus | 29.16 | 20.0 |
Protein Annotations
| EntrezGene:103647648 | MapMan:15.5.15 | UniProt:A0A1D6EUS5 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| InterPro:IPR013087 | ProteinID:ONM23408.1 | PFAM:PF12874 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF66 | SUPFAM:SSF57667 | UniParc:UPI000842B0F3 | EnsemblPlantsGene:Zm00001d006319 | EnsemblPlants:Zm00001d006319_P001 | EnsemblPlants:Zm00001d006319_T001 |
| InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : | : |
Description
Protein indeterminate-domain 5 chloroplastic
Coordinates
chr2:-:204432499..204451606
Molecular Weight (calculated)
59219.3 Da
IEP (calculated)
8.930
GRAVY (calculated)
-0.596
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRRARKLGR VIGDVQMRPR GTSLQQSSAS ALGDGDAALP KKKRNRPGNP KPDAEVIALS PRTLLATNRF VCEVCSKGFQ RDQNLQLHLR GHNMPWKLKQ
101: KDPKDARRRV YLCPEPTCVH HSPSRALGDL TGIKKHYCRK HGEKKFRCDR CSKRYAVESD WKAHGKTCGA REKDNFITHR ATCDAAVRGT AQKPPLVAGL
201: YVGSGSDDRL GLSDAAAQMH GFADQGQSSS AAEASQFDHV MPSYSGSSMF RSQASDFSLS FFLGGGTPLI EQDLSDNGGD LSEGSQGPLL HGKAPLHGVM
301: THLPEQQYQP NSGNANVNLL DIGFFSGNSG GTSGSQGPLL HGKEPFHSHD LTQLPEQQHQ PGSSNARVNL PNLGVFSGNS GGWPGSSHQD ARLVIQDQLN
401: GGSSSNTEHG NGMASIGSHF GGGFVPSLHN SSPSAGLSAT ALLMKAAQMG STTSSTTHNP NGPSALLRAA GFAGTASVRE TSSRAAEEEK SHEAYFHDLI
501: MNSLPLTGGG TGGLSGLAGV DDGNVSTRDF LGVGRDDATA PQGLHGMGAP NPTQMKWYM
101: KDPKDARRRV YLCPEPTCVH HSPSRALGDL TGIKKHYCRK HGEKKFRCDR CSKRYAVESD WKAHGKTCGA REKDNFITHR ATCDAAVRGT AQKPPLVAGL
201: YVGSGSDDRL GLSDAAAQMH GFADQGQSSS AAEASQFDHV MPSYSGSSMF RSQASDFSLS FFLGGGTPLI EQDLSDNGGD LSEGSQGPLL HGKAPLHGVM
301: THLPEQQYQP NSGNANVNLL DIGFFSGNSG GTSGSQGPLL HGKEPFHSHD LTQLPEQQHQ PGSSNARVNL PNLGVFSGNS GGWPGSSHQD ARLVIQDQLN
401: GGSSSNTEHG NGMASIGSHF GGGFVPSLHN SSPSAGLSAT ALLMKAAQMG STTSSTTHNP NGPSALLRAA GFAGTASVRE TSSRAAEEEK SHEAYFHDLI
501: MNSLPLTGGG TGGLSGLAGV DDGNVSTRDF LGVGRDDATA PQGLHGMGAP NPTQMKWYM
001: MSSSYNTIAL SSTPTFLLSS AAAGPGPNNF NRQEAAMTMV QQQPTSSVAP PPKKRRNQPG NPNPDAEVIA LSPKTIMATN RFLCEVCNKG FQREQNLQLH
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
101: RRGHNLPWKL KQKSNKEVRR KVYLCPEPSC VHHDPARALG DLTGIKKHYY RKHGEKKWKC DKCSKRYAVQ SDWKAHSKTC GTKEYRCDCG TIFSRRDSYI
201: THRAFCDALI QESARNPTVS FTAMAAGGGG GARHGFYGGA SSALSHNHFG NNPNSGFTPL AAAGYNLNRS SSDKFEDFVP QATNPNPGPT NFLMQCSPNQ
301: GLLAQNNQSL MNHHGLISLG DNNNNNHNFF NLAYFQDTKN SDQTGVPSLF TNGADNNGPS ALLRGLTSSS SSSVVVNDFG DCDHGNLQGL MNSLAATTDQ
401: QGRSPSLFDL HFANNLSMGG SDRLTLDFLG VNGGIVSTVN GRGGRSGGPP LDAEMKFSHP NHPYGKA
Arabidopsis Description
C2H2-like zinc finger protein [Source:TAIR;Acc:AT1G14580]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.