Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02307 | Sorghum | nucleus | 93.16 | 92.97 |
| Zm00001d008842_P001 | Maize | nucleus | 85.92 | 91.43 |
| Os01t0195000-01 | Rice | nucleus | 73.04 | 74.54 |
| TraesCS3D01G107300.1 | Wheat | nucleus | 72.03 | 73.36 |
| TraesCS3B01G123600.1 | Wheat | nucleus | 72.84 | 72.84 |
| TraesCS3A01G105100.1 | Wheat | nucleus | 72.43 | 72.58 |
| CDY70142 | Canola | nucleus | 21.33 | 58.24 |
| Zm00001d039254_P001 | Maize | nucleus | 35.21 | 49.44 |
| KRH10015 | Soybean | nucleus | 41.05 | 42.95 |
| KRH47108 | Soybean | nucleus | 42.86 | 42.77 |
| KRH23306 | Soybean | nucleus | 41.05 | 42.5 |
| Zm00001d009030_P002 | Maize | nucleus | 37.63 | 41.83 |
| Zm00001d011223_P002 | Maize | nucleus | 38.83 | 41.24 |
| AT1G55110.2 | Thale cress | nucleus | 37.63 | 41.1 |
| Bra030886.1-P | Field mustard | nucleus | 36.02 | 40.96 |
| Zm00001d044261_P001 | Maize | nucleus | 39.24 | 40.62 |
| KRH44134 | Soybean | nucleus | 43.06 | 40.38 |
| VIT_09s0002g02300.t01 | Wine grape | nucleus | 42.86 | 40.04 |
| Zm00001d032922_P001 | Maize | nucleus | 33.8 | 38.53 |
| PGSC0003DMT400012504 | Potato | nucleus | 38.63 | 38.25 |
| Solyc06g062670.2.1 | Tomato | nucleus | 38.23 | 37.77 |
| PGSC0003DMT400006385 | Potato | nucleus | 40.64 | 37.34 |
| Solyc03g121660.2.1 | Tomato | nucleus | 40.64 | 37.27 |
| Zm00001d021403_P001 | Maize | nucleus | 35.81 | 36.78 |
| Zm00001d028139_P001 | Maize | nucleus | 38.83 | 35.81 |
| Zm00001d016632_P001 | Maize | nucleus | 36.02 | 35.24 |
| Zm00001d026113_P006 | Maize | nucleus | 40.64 | 33.72 |
| Zm00001d042202_P001 | Maize | nucleus | 35.61 | 33.71 |
| Zm00001d017560_P001 | Maize | nucleus | 38.03 | 32.47 |
| Zm00001d031992_P001 | Maize | nucleus | 39.44 | 32.4 |
| Zm00001d002654_P003 | Maize | nucleus | 40.64 | 31.91 |
| Zm00001d006319_P001 | Maize | nucleus | 32.8 | 29.16 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 25.55 | 28.35 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 25.35 | 27.88 |
| CDY70938 | Canola | cytosol, nucleus | 15.09 | 27.47 |
| Zm00001d005871_P002 | Maize | nucleus | 24.35 | 27.44 |
| Zm00001d020683_P001 | Maize | nucleus | 24.95 | 24.95 |
| Zm00001d006682_P001 | Maize | nucleus | 36.42 | 24.39 |
| Zm00001d031759_P001 | Maize | nucleus | 24.55 | 23.55 |
| Zm00001d021932_P001 | Maize | nucleus | 35.81 | 21.84 |
Protein Annotations
| EntrezGene:103649624 | MapMan:15.5.15 | Gene3D:3.30.160.60 | UniProt:A0A1D6MHJ0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | ProteinID:ONM28906.1 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF49 | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0002213A38 | EnsemblPlantsGene:Zm00001d039467 | EnsemblPlants:Zm00001d039467_P001 |
| EnsemblPlants:Zm00001d039467_T001 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : | : |
Description
Protein indeterminate-domain 11
Coordinates
chr3:-:5057283..5059997
Molecular Weight (calculated)
52178.1 Da
IEP (calculated)
8.682
GRAVY (calculated)
-0.506
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLKDLAAIQ QHHHQQQLAA AAADENMSNL TSASGDQASV SSHPVPPPAK KKRSLPGNPD PDAEVIALSP RTLMATNRYV CEVCGKGFQR DQNLQLHRRG
101: HNLPWKLKQR NPKEVVRKKV YVCPEPGCVH HDPARALGDL TGIKKHFSRK HGEKKWKCDR CAKRYAVQSD WKAHSKVCGT REYRCDCGTL FSRRDSFITH
201: RAFCDALAEE SARAVTAAAA VAGQHHPGPA GMLFSQAAGG GDGGAGLHLP PGVLDPSQTL GGGHGMSLQE LCLKREQQQQ QQFAPSSWLT AQHHQQELEL
301: PGSAVFGLAR PLDQQEYMGN STTESTAGLS GFVGFSPSAA GGAAASAHMS ATALLQKAAQ MGATLSRPSN QGQMAGTHSS STTNAGTGTA NAAAAAASNV
401: PGTGAAGALG FGSPHHFGAE ERTTRPADRD AGNGSGNAAA VAAGGGNEGL TRDFLGLRAF SHGDILSMAG FDPCMSSASP AAYEQGHHHP SSKQWHV
101: HNLPWKLKQR NPKEVVRKKV YVCPEPGCVH HDPARALGDL TGIKKHFSRK HGEKKWKCDR CAKRYAVQSD WKAHSKVCGT REYRCDCGTL FSRRDSFITH
201: RAFCDALAEE SARAVTAAAA VAGQHHPGPA GMLFSQAAGG GDGGAGLHLP PGVLDPSQTL GGGHGMSLQE LCLKREQQQQ QQFAPSSWLT AQHHQQELEL
301: PGSAVFGLAR PLDQQEYMGN STTESTAGLS GFVGFSPSAA GGAAASAHMS ATALLQKAAQ MGATLSRPSN QGQMAGTHSS STTNAGTGTA NAAAAAASNV
401: PGTGAAGALG FGSPHHFGAE ERTTRPADRD AGNGSGNAAA VAAGGGNEGL TRDFLGLRAF SHGDILSMAG FDPCMSSASP AAYEQGHHHP SSKQWHV
001: MMMNRDILFH QQQQQQMEEN MSNLTSASGD QASVSSGNRT ETSGSNINQH HQEQCFVPQS SLKRKRNQPG NPDPEAEVMA LSPKTLMATN RFICEVCNKG
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
101: FQRDQNLQLH KRGHNLPWKL KQRSNKDVVR KKVYVCPEPG CVHHHPSRAL GDLTGIKKHF FRKHGEKKWK CEKCSKKYAV QSDWKAHAKT CGTKEYKCDC
201: GTLFSRRDSF ITHRAFCDAL AEESARAMPN PIMIQASNSP HHHHHQTQQN IGFSSSSQNI ISNSNLHGPM KQEESQHHYQ NIPPWLISSN PNPNGNNGNL
301: FPPVASSVNT GRSSFPHPSP AMSATALLQK AAQMGSTKST TPEEEERSSR SSYNNLITTT MAAMMTSPPE PGFGFQDYYM MNHQHHGGGE AFNGGFVPGE
401: EKNDVVDDGG GETRDFLGLR SLMSHNEILS FANNLGNCLN TSATEQQQQQ HSHQD
Arabidopsis Description
IDD7Protein indeterminate-domain 7 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.