Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d020683_P001 | Maize | nucleus | 87.76 | 77.87 |
| EER96827 | Sorghum | nucleus | 84.81 | 74.95 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 73.24 | 65.78 |
| TraesCS5A01G233700.1 | Wheat | nucleus | 73.24 | 65.78 |
| TraesCS5B01G232200.1 | Wheat | nucleus | 72.79 | 65.24 |
| CDX96046 | Canola | nucleus | 33.11 | 62.66 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 51.7 | 60.32 |
| Zm00001d031759_P001 | Maize | nucleus | 70.75 | 60.23 |
| Os08t0467100-01 | Rice | nucleus | 72.11 | 59.66 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 49.66 | 57.63 |
| Solyc01g005060.2.1 | Tomato | nucleus | 43.31 | 56.34 |
| KRH60588 | Soybean | nucleus | 50.79 | 56.0 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 46.94 | 55.95 |
| KRH41885 | Soybean | nucleus | 47.62 | 55.26 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 52.61 | 54.72 |
| GSMUA_Achr10P... | Banana | nucleus | 46.94 | 54.05 |
| Solyc06g072360.2.1 | Tomato | nucleus | 47.39 | 53.32 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 51.25 | 53.18 |
| PGSC0003DMT400079735 | Potato | nucleus, plastid | 51.25 | 51.72 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 44.67 | 51.44 |
| PGSC0003DMT400069306 | Potato | nucleus | 47.85 | 51.34 |
| VIT_17s0000g01870.t01 | Wine grape | nucleus | 51.93 | 50.33 |
| CDY04204 | Canola | nucleus | 40.82 | 50.14 |
| KRH38986 | Soybean | nucleus | 53.29 | 49.58 |
| AT1G25250.3 | Thale cress | nucleus | 43.08 | 49.35 |
| CDY36123 | Canola | nucleus | 42.18 | 49.21 |
| Bra010981.1-P | Field mustard | nucleus | 42.18 | 49.21 |
| CDY51986 | Canola | nucleus | 41.95 | 48.94 |
| CDX84974 | Canola | nucleus | 42.4 | 48.83 |
| CDY60366 | Canola | nucleus | 42.4 | 48.83 |
| KRH48724 | Soybean | nucleus | 53.29 | 48.65 |
| Bra024771.1-P | Field mustard | nucleus | 42.18 | 48.56 |
| KRH58582 | Soybean | nucleus | 48.3 | 48.41 |
| Solyc03g098070.2.1 | Tomato | nucleus | 39.91 | 48.35 |
| GSMUA_Achr10P... | Banana | nucleus | 43.31 | 47.87 |
| CDY04203 | Canola | plastid | 41.5 | 47.53 |
| KRH42485 | Soybean | nucleus | 48.3 | 47.12 |
| Bra004050.1-P | Field mustard | nucleus | 43.76 | 46.73 |
| CDY07400 | Canola | nucleus | 43.76 | 46.73 |
| Bra026624.1-P | Field mustard | nucleus | 45.8 | 46.12 |
| Bra004283.1-P | Field mustard | nucleus | 43.08 | 46.12 |
| AT1G68130.1 | Thale cress | nucleus | 43.76 | 46.06 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 47.17 | 46.02 |
| Bra017432.1-P | Field mustard | nucleus | 45.8 | 45.91 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 46.49 | 45.76 |
| CDY09400 | Canola | nucleus | 45.35 | 45.66 |
| CDY17620 | Canola | nucleus | 45.8 | 45.5 |
| Bra024841.1-P | Field mustard | nucleus | 45.8 | 45.5 |
| AT2G01940.3 | Thale cress | nucleus | 45.8 | 45.29 |
| CDY63960 | Canola | nucleus | 46.26 | 45.23 |
| CDY04102 | Canola | nucleus | 45.8 | 44.99 |
| CDY15800 | Canola | nucleus | 44.67 | 44.57 |
| CDY60095 | Canola | nucleus | 44.44 | 44.34 |
| Solyc05g054030.2.1 | Tomato | nucleus | 36.28 | 41.99 |
| Zm00001d039254_P001 | Maize | nucleus | 25.62 | 31.92 |
| Zm00001d009030_P002 | Maize | nucleus | 27.66 | 27.29 |
| Zm00001d008842_P001 | Maize | nucleus | 27.89 | 26.34 |
| Zm00001d032922_P001 | Maize | nucleus | 24.94 | 25.23 |
| Zm00001d011223_P002 | Maize | nucleus | 26.76 | 25.21 |
| Zm00001d044261_P001 | Maize | nucleus | 26.98 | 24.79 |
| Zm00001d039467_P001 | Maize | nucleus | 27.44 | 24.35 |
| Zm00001d042202_P001 | Maize | nucleus | 28.57 | 24.0 |
| Zm00001d028139_P001 | Maize | nucleus | 28.8 | 23.56 |
| Zm00001d021403_P001 | Maize | nucleus | 25.4 | 23.14 |
| Zm00001d016632_P001 | Maize | nucleus | 25.62 | 22.24 |
| Zm00001d006319_P001 | Maize | nucleus | 28.12 | 22.18 |
| Zm00001d017560_P001 | Maize | nucleus | 28.34 | 21.48 |
| Zm00001d026113_P006 | Maize | nucleus | 28.34 | 20.87 |
| Zm00001d031992_P001 | Maize | nucleus | 27.66 | 20.17 |
| Zm00001d002654_P003 | Maize | nucleus | 27.21 | 18.96 |
| Zm00001d006682_P001 | Maize | nucleus | 27.44 | 16.31 |
| Zm00001d021932_P001 | Maize | nucleus | 27.66 | 14.97 |
Protein Annotations
| EnsemblPlants:Zm00001d005871_P002 | EnsemblPlants:Zm00001d005871_T002 | EnsemblPlantsGene:Zm00001d005871 | Gene3D:3.30.160.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF43 | PFscan:PS50157 | ProteinID:ONM22292.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI00084299CA | UniProt:A0A1D6ERC9 | MapMan:15.5.15 | : | : |
Description
Protein SHOOT GRAVITROPISM 5
Coordinates
chr2:-:191279063..191282059
Molecular Weight (calculated)
47232.0 Da
IEP (calculated)
9.383
GRAVY (calculated)
-0.475
Length
441 amino acids
Sequence
(BLAST)
(BLAST)
001: MLGFCAPSAC SPPDEATPEP FRSLQIATTV AAAAATTKKK RRPAGTPDPD AEVVSLSPRT LLESDRYVCE ICGQGFQRDQ NLQMHRRRHK VPWKLLKREA
101: GEAARKRVFV CPEPSCLHHH PSHALGDLVG IKKHFRRKHS GQRQWACARC SKAYAVHSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ DSCNAGQARA
201: GAGVAAASAG SQQQAPPAMS LSRTASSTSP SSDIAISPVA AWPAGPAPAI PSPASTAAFH WFEQVPSPRT PPPSVHHRGG HNLELQLMPP SCSGAGGDAP
301: PRTPAAPSQS HAAAMAMQLQ LSIGVCGDAG DEVLAAAREE EAREQLRQAV AEKAAADEAR AQAKRQAELA ERELASAKRM RRQAQVELSR AHAVRDHALR
401: QVNATLLQIT CLGCRHKFHA RPQLDAVPAR WPAAAATCPP S
101: GEAARKRVFV CPEPSCLHHH PSHALGDLVG IKKHFRRKHS GQRQWACARC SKAYAVHSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ DSCNAGQARA
201: GAGVAAASAG SQQQAPPAMS LSRTASSTSP SSDIAISPVA AWPAGPAPAI PSPASTAAFH WFEQVPSPRT PPPSVHHRGG HNLELQLMPP SCSGAGGDAP
301: PRTPAAPSQS HAAAMAMQLQ LSIGVCGDAG DEVLAAAREE EAREQLRQAV AEKAAADEAR AQAKRQAELA ERELASAKRM RRQAQVELSR AHAVRDHALR
401: QVNATLLQIT CLGCRHKFHA RPQLDAVPAR WPAAAATCPP S
001: MIDYERSNTT KNINTHHHNP PPSSSSSDLL PDGNGTAVTQ KRKRRPAGTP DPEAEVVSLS PRTLLESDRY VCEICNQGFQ RDQNLQMHRR RHKVPWKLLK
101: RETNEEVRKR VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSNHKQWIC ERCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDTCTVRR
201: SQPSNHRLHE QQQHTTNATQ TASTAENNEN GDLSIGPILP GHPLQRRQSP PSEQQPSTLL YPFVTNGSIE LQLLPSRNCA DETSLSLSIG TMDQKTMSEV
301: EKKSYEKGET SLEREEARRE TKRQIEIAEL EFAEAKRIRQ HARAELHKAH LFREEASRRI SATMMQITCH NCKQHFQAPA ALVPPPPQTH CTDESTSLAV
401: SYMSSATTEG EKASDRASS
101: RETNEEVRKR VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSNHKQWIC ERCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDTCTVRR
201: SQPSNHRLHE QQQHTTNATQ TASTAENNEN GDLSIGPILP GHPLQRRQSP PSEQQPSTLL YPFVTNGSIE LQLLPSRNCA DETSLSLSIG TMDQKTMSEV
301: EKKSYEKGET SLEREEARRE TKRQIEIAEL EFAEAKRIRQ HARAELHKAH LFREEASRRI SATMMQITCH NCKQHFQAPA ALVPPPPQTH CTDESTSLAV
401: SYMSSATTEG EKASDRASS
Arabidopsis Description
IDD14Protein indeterminate-domain 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.