Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004050.1-P | Field mustard | nucleus | 98.61 | 85.71 |
| CDY07400 | Canola | nucleus | 98.61 | 85.71 |
| CDY04203 | Canola | plastid | 83.29 | 77.66 |
| CDX96046 | Canola | nucleus | 50.14 | 77.25 |
| AT1G68130.1 | Thale cress | nucleus | 87.19 | 74.7 |
| CDY09390 | Canola | nucleus | 20.89 | 63.03 |
| CDY04118 | Canola | nucleus | 20.89 | 63.03 |
| CDY60366 | Canola | nucleus | 59.61 | 55.87 |
| CDY14910 | Canola | nucleus | 20.61 | 55.64 |
| CDX84974 | Canola | nucleus | 59.33 | 55.61 |
| CDY36123 | Canola | nucleus | 55.99 | 53.17 |
| CDY51986 | Canola | nucleus | 55.71 | 52.91 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 59.89 | 50.59 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 52.09 | 50.54 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 51.81 | 48.95 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 51.53 | 48.94 |
| CDY72283 | Canola | nucleus | 25.35 | 48.15 |
| KRH58582 | Soybean | nucleus | 58.77 | 47.95 |
| CDY37489 | Canola | nucleus | 24.23 | 47.28 |
| KRH42485 | Soybean | nucleus | 59.33 | 47.12 |
| CDY17620 | Canola | nucleus | 57.94 | 46.85 |
| CDY60095 | Canola | nucleus | 57.66 | 46.83 |
| CDY15800 | Canola | nucleus | 57.66 | 46.83 |
| CDY09400 | Canola | nucleus | 57.1 | 46.8 |
| GSMUA_Achr10P... | Banana | nucleus | 49.58 | 46.48 |
| CDY63960 | Canola | nucleus | 57.66 | 45.9 |
| CDY04102 | Canola | nucleus | 57.1 | 45.66 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 52.92 | 44.81 |
| CDY53540 | Canola | nucleus | 23.4 | 43.3 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 45.96 | 43.08 |
| GSMUA_Achr10P... | Banana | nucleus | 46.24 | 41.6 |
| CDY04117 | Canola | nucleus | 24.79 | 41.59 |
| Zm00001d005871_P002 | Maize | nucleus | 50.14 | 40.82 |
| TraesCS4B01G230800.1 | Wheat | nucleus, plastid | 45.13 | 40.0 |
| Solyc05g054030.2.1 | Tomato | nucleus | 42.06 | 39.63 |
| TraesCS5A01G233700.1 | Wheat | nucleus | 53.48 | 39.1 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 53.2 | 38.9 |
| TraesCS4D01G232000.1 | Wheat | nucleus, plastid | 44.85 | 38.89 |
| TraesCS4A01G074700.1 | Wheat | nucleus, plastid | 44.57 | 38.55 |
| TraesCS5B01G232200.1 | Wheat | nucleus | 52.65 | 38.41 |
| Os03t0237250-01 | Rice | plastid | 46.8 | 38.36 |
| Zm00001d020683_P001 | Maize | nucleus | 52.92 | 38.23 |
| HORVU4Hr1G064740.2 | Barley | nucleus, plastid | 45.13 | 38.12 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 47.63 | 37.83 |
| EER96827 | Sorghum | nucleus | 52.09 | 37.47 |
| Zm00001d031759_P001 | Maize | nucleus | 52.92 | 36.68 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 45.68 | 36.61 |
| KXG39813 | Sorghum | nucleus, plastid | 46.24 | 36.17 |
| Os08t0467100-01 | Rice | nucleus | 53.48 | 36.02 |
| EES13982 | Sorghum | nucleus | 53.76 | 36.01 |
| CDY70142 | Canola | nucleus | 18.11 | 35.71 |
| CDX97281 | Canola | nucleus, plastid | 29.53 | 27.53 |
| CDX91304 | Canola | nucleus, plastid | 29.53 | 26.24 |
| CDX77936 | Canola | nucleus | 30.08 | 24.77 |
| CDY24490 | Canola | nucleus | 29.8 | 24.6 |
| CDX75732 | Canola | nucleus | 29.25 | 23.7 |
| CDX94759 | Canola | nucleus | 30.36 | 23.49 |
| CDY22307 | Canola | nucleus | 30.36 | 23.49 |
| CDY59418 | Canola | nucleus | 27.02 | 23.49 |
| CDX82515 | Canola | nucleus | 28.41 | 23.13 |
| CDX86010 | Canola | nucleus | 28.69 | 22.99 |
| CDY53836 | Canola | nucleus | 28.69 | 22.74 |
| CDX89862 | Canola | nucleus | 30.36 | 22.71 |
| CDY18188 | Canola | nucleus | 30.08 | 22.55 |
| CDY67009 | Canola | nucleus | 29.25 | 22.06 |
| CDY51742 | Canola | nucleus | 29.53 | 21.9 |
| CDY32514 | Canola | nucleus | 29.8 | 21.84 |
| CDY15814 | Canola | nucleus | 28.69 | 21.78 |
| CDX97521 | Canola | nucleus | 28.97 | 21.44 |
| CDY55238 | Canola | nucleus | 28.69 | 21.19 |
| CDY17440 | Canola | nucleus | 27.86 | 20.92 |
| CDX81372 | Canola | nucleus | 28.41 | 20.86 |
| CDX81653 | Canola | nucleus | 27.02 | 20.77 |
| CDY45271 | Canola | nucleus | 23.96 | 20.67 |
| CDY57128 | Canola | nucleus | 28.13 | 20.53 |
| CDY10404 | Canola | nucleus | 28.41 | 20.12 |
| CDY45270 | Canola | nucleus | 25.07 | 20.0 |
| CDY11241 | Canola | nucleus | 27.86 | 19.88 |
| CDX80854 | Canola | nucleus | 27.86 | 19.8 |
| CDY44344 | Canola | nucleus | 27.58 | 19.8 |
| CDY17614 | Canola | nucleus, plastid | 28.13 | 19.69 |
| CDX70328 | Canola | nucleus | 28.13 | 19.65 |
| CDY03081 | Canola | nucleus | 28.41 | 19.47 |
| CDY03080 | Canola | nucleus, plastid | 27.86 | 19.38 |
| CDY17615 | Canola | nucleus | 28.41 | 19.35 |
| CDY09391 | Canola | nucleus | 29.25 | 18.52 |
| CDY15811 | Canola | nucleus | 29.25 | 18.49 |
| CDY12268 | Canola | nucleus | 20.33 | 16.37 |
| CDY68983 | Canola | nucleus | 17.27 | 15.86 |
| CDY70938 | Canola | cytosol, nucleus | 10.59 | 13.92 |
| CDY67587 | Canola | cytosol, nucleus | 7.52 | 12.0 |
Protein Annotations
| MapMan:15.5.15 | Gene3D:3.30.160.60 | GO:A0A078EUE4 | EnsemblPlants:CDY04204 | ProteinID:CDY04204 | ProteinID:CDY04204.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003713 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007219 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0016607 | GO:GO:0045944 | EnsemblPlantsGene:GSBRNA2T00117913001 | InterPro:IPR013087 | InterPro:Neuroggenic_mastermind-like_N | PFAM:PF00096 |
| PFAM:PF09596 | ScanProsite:PS00028 | PFscan:PS50157 | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF43 | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EEF0EC | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | SEG:seg | : |
Description
BnaC06g26110D
Coordinates
chrLK031950:+:92826..95517
Molecular Weight (calculated)
40490.9 Da
IEP (calculated)
8.334
GRAVY (calculated)
-0.711
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MIIFNILYPE AEVVSLSPRT LLESDRYVCE ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET NEEVKKRVYV CPEPTCLHHN PCHALGDLVG IKKHFRRKHS
101: NHKQWICERC SKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ DNCTMRQPQP SSHRLQQQQQ HTANAAQTAS TAENIDLNIG PVLPGHPLLR
201: QSPPSDQQPS DLLYPFVGSS ASTGSGIELQ LLPSRASADG TSLSLSIGMD TTMSSYEKGE TSLLLGEREE AKRQIEIAEL EYAEAKRIRQ HARGELHKAQ
301: LYREEARRRI SATIMQITCH NCKKHFQAPP CTDESTSLAV SYASSATTEG EKASDRASS
101: NHKQWICERC SKGYAVQSDY KAHLKTCGTR GHSCDCGRVF SRVESFIEHQ DNCTMRQPQP SSHRLQQQQQ HTANAAQTAS TAENIDLNIG PVLPGHPLLR
201: QSPPSDQQPS DLLYPFVGSS ASTGSGIELQ LLPSRASADG TSLSLSIGMD TTMSSYEKGE TSLLLGEREE AKRQIEIAEL EYAEAKRIRQ HARGELHKAQ
301: LYREEARRRI SATIMQITCH NCKKHFQAPP CTDESTSLAV SYASSATTEG EKASDRASS
001: MIDYERSNTT KNINTHHHNP PPSSSSSDLL PDGNGTAVTQ KRKRRPAGTP DPEAEVVSLS PRTLLESDRY VCEICNQGFQ RDQNLQMHRR RHKVPWKLLK
101: RETNEEVRKR VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSNHKQWIC ERCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDTCTVRR
201: SQPSNHRLHE QQQHTTNATQ TASTAENNEN GDLSIGPILP GHPLQRRQSP PSEQQPSTLL YPFVTNGSIE LQLLPSRNCA DETSLSLSIG TMDQKTMSEV
301: EKKSYEKGET SLEREEARRE TKRQIEIAEL EFAEAKRIRQ HARAELHKAH LFREEASRRI SATMMQITCH NCKQHFQAPA ALVPPPPQTH CTDESTSLAV
401: SYMSSATTEG EKASDRASS
101: RETNEEVRKR VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSNHKQWIC ERCSKGYAVQ SDYKAHLKTC GTRGHSCDCG RVFSRVESFI EHQDTCTVRR
201: SQPSNHRLHE QQQHTTNATQ TASTAENNEN GDLSIGPILP GHPLQRRQSP PSEQQPSTLL YPFVTNGSIE LQLLPSRNCA DETSLSLSIG TMDQKTMSEV
301: EKKSYEKGET SLEREEARRE TKRQIEIAEL EFAEAKRIRQ HARAELHKAH LFREEASRRI SATMMQITCH NCKQHFQAPA ALVPPPPQTH CTDESTSLAV
401: SYMSSATTEG EKASDRASS
Arabidopsis Description
IDD14Protein indeterminate-domain 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.