Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60366 | Canola | nucleus | 98.69 | 98.69 |
| CDY36123 | Canola | nucleus | 81.98 | 83.07 |
| CDY51986 | Canola | nucleus | 81.2 | 82.28 |
| AT1G25250.3 | Thale cress | nucleus | 79.63 | 79.22 |
| CDX96046 | Canola | nucleus | 45.17 | 74.25 |
| CDY04118 | Canola | nucleus | 19.06 | 61.34 |
| CDY09390 | Canola | nucleus | 18.54 | 59.66 |
| CDY04204 | Canola | nucleus | 55.61 | 59.33 |
| CDY04203 | Canola | plastid | 59.27 | 58.96 |
| CDY14910 | Canola | nucleus | 20.37 | 58.65 |
| CDY07400 | Canola | nucleus | 62.66 | 58.11 |
| VIT_01s0011g06400.t01 | Wine grape | nucleus | 60.05 | 54.12 |
| GSMUA_Achr7P18610_001 | Banana | nucleus | 52.48 | 53.17 |
| GSMUA_Achr6P02490_001 | Banana | nucleus | 50.13 | 51.89 |
| CDY72283 | Canola | nucleus | 25.59 | 51.85 |
| KRH58582 | Soybean | nucleus | 59.53 | 51.82 |
| GSMUA_Achr5P23130_001 | Banana | nucleus | 51.17 | 51.58 |
| CDY09400 | Canola | nucleus | 58.22 | 50.91 |
| CDY37489 | Canola | nucleus | 24.28 | 50.54 |
| CDY15800 | Canola | nucleus | 58.22 | 50.45 |
| GSMUA_Achr10P... | Banana | nucleus | 50.39 | 50.39 |
| CDY63960 | Canola | nucleus | 59.27 | 50.33 |
| KRH42485 | Soybean | nucleus | 59.27 | 50.22 |
| CDY04102 | Canola | nucleus | 58.75 | 50.11 |
| GSMUA_Achr3P20220_001 | Banana | nucleus | 54.57 | 49.29 |
| CDY60095 | Canola | nucleus | 56.66 | 49.09 |
| CDY17620 | Canola | nucleus | 56.66 | 48.87 |
| GSMUA_Achr2P21680_001 | Banana | nucleus, plastid | 46.74 | 46.74 |
| CDY53540 | Canola | nucleus | 22.98 | 45.36 |
| TraesCS4B01G230800.1 | Wheat | nucleus, plastid | 45.69 | 43.21 |
| GSMUA_Achr10P... | Banana | nucleus | 44.91 | 43.11 |
| Solyc05g054030.2.1 | Tomato | nucleus | 42.82 | 43.04 |
| CDY04117 | Canola | nucleus | 23.76 | 42.52 |
| TraesCS4A01G074700.1 | Wheat | nucleus, plastid | 45.95 | 42.41 |
| Zm00001d005871_P002 | Maize | nucleus | 48.83 | 42.4 |
| TraesCS4D01G232000.1 | Wheat | nucleus, plastid | 45.69 | 42.27 |
| Os03t0237250-01 | Rice | plastid | 47.52 | 41.55 |
| HORVU4Hr1G064740.2 | Barley | nucleus, plastid | 45.95 | 41.41 |
| TraesCS5D01G240600.1 | Wheat | nucleus | 53.0 | 41.34 |
| TraesCS5B01G232200.1 | Wheat | nucleus | 53.0 | 41.26 |
| TraesCS5A01G233700.1 | Wheat | nucleus | 52.74 | 41.14 |
| CDY70142 | Canola | nucleus | 19.06 | 40.11 |
| Zm00001d028361_P001 | Maize | nucleus, plastid | 46.74 | 39.6 |
| Zm00001d047976_P001 | Maize | nucleus, plastid | 46.21 | 39.51 |
| Zm00001d020683_P001 | Maize | nucleus | 51.17 | 39.44 |
| EER96827 | Sorghum | nucleus | 50.13 | 38.48 |
| KXG39813 | Sorghum | nucleus, plastid | 45.95 | 38.34 |
| Os08t0467100-01 | Rice | nucleus | 52.74 | 37.9 |
| Zm00001d031759_P001 | Maize | nucleus | 51.17 | 37.84 |
| EES13982 | Sorghum | nucleus | 51.7 | 36.94 |
| CDX97281 | Canola | nucleus, plastid | 27.94 | 27.79 |
| CDY24490 | Canola | nucleus | 30.55 | 26.9 |
| CDX91304 | Canola | nucleus, plastid | 28.2 | 26.73 |
| CDX77936 | Canola | nucleus | 30.03 | 26.38 |
| CDX94759 | Canola | nucleus | 30.29 | 25.0 |
| CDY22307 | Canola | nucleus | 30.29 | 25.0 |
| CDX75732 | Canola | nucleus | 28.72 | 24.83 |
| CDX86010 | Canola | nucleus | 28.98 | 24.78 |
| CDY53836 | Canola | nucleus | 29.24 | 24.72 |
| CDY67009 | Canola | nucleus | 30.29 | 24.37 |
| CDX82515 | Canola | nucleus | 27.94 | 24.26 |
| CDY18188 | Canola | nucleus | 29.77 | 23.8 |
| CDX89862 | Canola | nucleus | 29.77 | 23.75 |
| CDY59418 | Canola | nucleus | 25.59 | 23.73 |
| CDY32514 | Canola | nucleus | 30.29 | 23.67 |
| CDY57128 | Canola | nucleus | 29.5 | 22.97 |
| CDY51742 | Canola | nucleus | 28.98 | 22.93 |
| CDX81372 | Canola | nucleus | 29.24 | 22.9 |
| CDY55238 | Canola | nucleus | 28.98 | 22.84 |
| CDX97521 | Canola | nucleus | 28.72 | 22.68 |
| CDY17440 | Canola | nucleus | 27.68 | 22.18 |
| CDY45271 | Canola | nucleus | 24.02 | 22.12 |
| CDY15814 | Canola | nucleus | 26.89 | 21.78 |
| CDY44344 | Canola | nucleus | 28.2 | 21.6 |
| CDX80854 | Canola | nucleus | 28.46 | 21.58 |
| CDY11241 | Canola | nucleus | 28.2 | 21.47 |
| CDX81653 | Canola | nucleus | 26.11 | 21.41 |
| CDY45270 | Canola | nucleus | 25.07 | 21.33 |
| CDY10404 | Canola | nucleus | 28.2 | 21.3 |
| CDY17614 | Canola | nucleus, plastid | 28.46 | 21.25 |
| CDY03080 | Canola | nucleus, plastid | 28.46 | 21.12 |
| CDY03081 | Canola | nucleus | 28.72 | 20.99 |
| CDY17615 | Canola | nucleus | 28.72 | 20.87 |
| CDX70328 | Canola | nucleus | 27.94 | 20.82 |
| CDY09391 | Canola | nucleus | 29.24 | 19.75 |
| CDY15811 | Canola | nucleus | 29.24 | 19.72 |
| CDY12268 | Canola | nucleus | 21.15 | 18.16 |
| CDY68983 | Canola | nucleus | 17.75 | 17.39 |
| CDY70938 | Canola | cytosol, nucleus | 9.4 | 13.19 |
| CDY67587 | Canola | cytosol, nucleus | 6.79 | 11.56 |
Protein Annotations
| EnsemblPlants:CDX84974 | EnsemblPlantsGene:GSBRNA2T00142371001 | Gene3D:3.30.160.60 | GO:A0A078D9M9 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | ncoils:Coil | PANTHER:PTHR10593 |
| PANTHER:PTHR10593:SF43 | PFAM:PF12874 | PFscan:PS50157 | ProteinID:CDX84974 | ProteinID:CDX84974.1 | ScanProsite:PS00028 |
| SEG:seg | SMART:SM00355 | SUPFAM:SSF57667 | UniParc:UPI0004EF4C52 | MapMan:15.5.15 | : |
Description
BnaC05g20810D
Coordinates
chrLK031839:+:977747..980130
Molecular Weight (calculated)
43567.0 Da
IEP (calculated)
9.089
GRAVY (calculated)
-0.769
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MIDFEKNINH PSSSSSDLLL AINGTTVNNK RKRRPAGTPD PDAEVVSLSP RTLLESDRYV CEICNQGFQR DQNLQMHRRR HKVPWKLLKR EKKDEEVRKR
101: VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSAHKQWVC DRCSKGYAVQ SDYKAHLKTC GSRGHSCDCG RVFSRVESFI EHQDTCTIRR PQPSNPPRPL
201: KQNTSCHATP SITLSTPSIG PLLHGLPMLR PPQASHQQAL ASAYPLNASS SSYESLQLQL SIGMAKTSSN LKRSEKGEMS LALERANEEA RRADEMRQEA
301: KRQVEMAEMD FERAKNIREE AKAELEKAQF VREEAMERIK TTILEITCRS CKQLFQLPVM ADESKTSLVM SYVSSARTEG EFE
101: VYVCPEPTCL HHNPCHALGD LVGIKKHFRR KHSAHKQWVC DRCSKGYAVQ SDYKAHLKTC GSRGHSCDCG RVFSRVESFI EHQDTCTIRR PQPSNPPRPL
201: KQNTSCHATP SITLSTPSIG PLLHGLPMLR PPQASHQQAL ASAYPLNASS SSYESLQLQL SIGMAKTSSN LKRSEKGEMS LALERANEEA RRADEMRQEA
301: KRQVEMAEMD FERAKNIREE AKAELEKAQF VREEAMERIK TTILEITCRS CKQLFQLPVM ADESKTSLVM SYVSSARTEG EFE
001: MIHYEQNNNL QNLPSSSSND LLLGINGADA THKRKRRPAG TPDPDAEVVS LSPRTLLESD RYVCEICNQG FQRDQNLQMH RRRHKVPWKL LKRDKKDEEV
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
101: RKRVYVCPEP TCLHHDPCHA LGDLVGIKKH FRRKHSVHKQ WVCERCSKGY AVQSDYKAHL KTCGSRGHSC DCGRVFSRVE SFIEHQDTCT IRQPQPTNHR
201: HLQQHTMGLD APSRTTSTAS FGPLLHGLPL LRPPRPSNQH SPAFAYPFNA SSAPFESLEL QLSIGMARTS AQARHNEKRE TSLTKERANE EARKAEETRQ
301: EAKRQIEMAE KDFEKAKRIR EEAKTELEKA HVVREEAIKR INATMMEITC HSCKQLFQLP VTADESTSSL VMSYVSSATT EGECE
Arabidopsis Description
AtIDD16IDD16 [Source:UniProtKB/TrEMBL;Acc:A0A178WG74]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.