Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77936 | Canola | nucleus | 97.24 | 97.02 |
| CDY04118 | Canola | nucleus | 22.99 | 84.03 |
| CDY09390 | Canola | nucleus | 22.53 | 82.35 |
| AT3G50700.1 | Thale cress | nucleus | 84.83 | 81.64 |
| CDY14910 | Canola | nucleus | 22.3 | 72.93 |
| CDY37489 | Canola | nucleus | 29.66 | 70.11 |
| CDY72283 | Canola | nucleus | 29.43 | 67.72 |
| CDX81372 | Canola | nucleus | 71.72 | 63.8 |
| CDY57128 | Canola | nucleus | 71.49 | 63.21 |
| CDY67009 | Canola | nucleus | 68.28 | 62.4 |
| CDY53540 | Canola | nucleus | 27.36 | 61.34 |
| CDY04117 | Canola | nucleus | 29.66 | 60.28 |
| CDY70142 | Canola | nucleus | 23.45 | 56.04 |
| VIT_04s0023g01430.t01 | Wine grape | nucleus | 62.3 | 53.56 |
| KRH76829 | Soybean | nucleus | 61.61 | 51.84 |
| KRH08298 | Soybean | nucleus | 58.16 | 49.51 |
| KRH69942 | Soybean | nucleus | 58.16 | 48.19 |
| KRH69941 | Soybean | nucleus, plastid | 58.16 | 48.19 |
| PGSC0003DMT400033039 | Potato | nucleus, plastid | 57.24 | 47.43 |
| CDX97281 | Canola | nucleus, plastid | 38.85 | 43.9 |
| CDX96046 | Canola | nucleus | 23.45 | 43.78 |
| CDX91304 | Canola | nucleus, plastid | 39.08 | 42.08 |
| TraesCS4A01G041400.1 | Wheat | nucleus | 45.29 | 40.45 |
| TraesCS4B01G262400.1 | Wheat | nucleus | 48.97 | 40.34 |
| TraesCS4D01G262500.1 | Wheat | nucleus | 48.28 | 39.92 |
| GSMUA_Achr4P14030_001 | Banana | nucleus | 49.66 | 39.78 |
| HORVU4Hr1G070950.8 | Barley | nucleus | 48.97 | 39.74 |
| EER95332 | Sorghum | nucleus | 47.82 | 39.62 |
| CDX86010 | Canola | nucleus | 40.69 | 39.51 |
| CDY53836 | Canola | nucleus | 40.69 | 39.07 |
| Zm00001d028139_P001 | Maize | nucleus | 48.28 | 38.96 |
| CDX75732 | Canola | nucleus | 39.54 | 38.83 |
| CDY22307 | Canola | nucleus | 41.38 | 38.79 |
| GSMUA_Achr3P29940_001 | Banana | nucleus | 51.72 | 38.73 |
| CDX94759 | Canola | nucleus | 41.15 | 38.58 |
| CDY18188 | Canola | nucleus | 42.3 | 38.41 |
| CDY32514 | Canola | nucleus | 43.22 | 38.37 |
| CDY59418 | Canola | nucleus | 36.32 | 38.26 |
| CDX89862 | Canola | nucleus | 42.07 | 38.12 |
| CDX82515 | Canola | nucleus | 38.39 | 37.87 |
| GSMUA_Achr4P07200_001 | Banana | nucleus | 46.9 | 37.78 |
| Os03t0197800-00 | Rice | nucleus | 47.82 | 37.68 |
| GSMUA_Achr7P25960_001 | Banana | nucleus | 51.26 | 37.67 |
| CDY45271 | Canola | nucleus | 35.63 | 37.26 |
| Solyc02g062940.2.1 | Tomato | nucleus | 56.09 | 37.2 |
| CDY51742 | Canola | nucleus | 41.38 | 37.19 |
| CDX97521 | Canola | nucleus | 41.38 | 37.11 |
| CDY55238 | Canola | nucleus | 40.46 | 36.21 |
| CDY11241 | Canola | nucleus | 41.38 | 35.79 |
| CDX80854 | Canola | nucleus | 41.15 | 35.45 |
| CDY44344 | Canola | nucleus | 40.46 | 35.2 |
| CDY17440 | Canola | nucleus | 38.62 | 35.15 |
| CDY45270 | Canola | nucleus | 36.32 | 35.11 |
| CDY10404 | Canola | nucleus | 40.92 | 35.11 |
| CDY03081 | Canola | nucleus | 42.07 | 34.92 |
| CDY17615 | Canola | nucleus | 42.3 | 34.91 |
| CDX81653 | Canola | nucleus | 37.47 | 34.9 |
| CDY15814 | Canola | nucleus | 37.24 | 34.25 |
| CDX70328 | Canola | nucleus | 40.46 | 34.24 |
| CDY17614 | Canola | nucleus, plastid | 40.0 | 33.92 |
| CDY03080 | Canola | nucleus, plastid | 39.77 | 33.53 |
| CDY15811 | Canola | nucleus | 43.22 | 33.1 |
| PGSC0003DMT400040064 | Potato | nucleus | 55.63 | 32.88 |
| CDY09391 | Canola | nucleus | 42.76 | 32.8 |
| CDX84974 | Canola | nucleus | 26.9 | 30.55 |
| CDY36123 | Canola | nucleus | 26.44 | 30.42 |
| CDY51986 | Canola | nucleus | 26.44 | 30.42 |
| CDY60366 | Canola | nucleus | 26.67 | 30.29 |
| CDY04204 | Canola | nucleus | 24.6 | 29.8 |
| CDY17620 | Canola | nucleus | 29.2 | 28.6 |
| CDY04203 | Canola | plastid | 25.29 | 28.57 |
| CDY60095 | Canola | nucleus | 28.74 | 28.28 |
| CDY09400 | Canola | nucleus | 28.28 | 28.08 |
| CDY07400 | Canola | nucleus | 26.44 | 27.84 |
| CDY04102 | Canola | nucleus | 28.51 | 27.62 |
| CDY15800 | Canola | nucleus | 28.05 | 27.6 |
| CDY63960 | Canola | nucleus | 28.51 | 27.49 |
| CDY70938 | Canola | cytosol, nucleus | 17.24 | 27.47 |
| CDY12268 | Canola | nucleus | 28.05 | 27.35 |
| CDY67587 | Canola | cytosol, nucleus | 13.56 | 26.22 |
| CDY68983 | Canola | nucleus | 23.45 | 26.09 |
Protein Annotations
| EnsemblPlants:CDY24490 | EnsemblPlantsGene:GSBRNA2T00026782001 | Gene3D:3.30.160.60 | GO:A0A078GDB0 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | InterPro:IPR013087 | InterPro:Znf_C2H2_sf | InterPro:Znf_C2H2_type | PANTHER:PTHR10593 | PANTHER:PTHR10593:SF20 |
| PFscan:PS50157 | ProteinID:CDY24490 | ProteinID:CDY24490.1 | ScanProsite:PS00028 | SEG:seg | SMART:SM00355 |
| SUPFAM:SSF57667 | UniParc:UPI0004EE964E | UniProt:A0A078GDB0 | MapMan:15.5.15 | : | : |
Description
BnaC05g34640DBnaC05g34640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDB0]
Coordinates
chrLK032159:+:595064..597507
Molecular Weight (calculated)
46317.1 Da
IEP (calculated)
9.835
GRAVY (calculated)
-0.476
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVDLDNSST VSGEASVSST GNQQNPLPKS AAKKKRNLPG MPDPDSEVIA LSPKTLLATN RFVCEICNKG FQRDQNLQLH RRGHNLPWKL RQKSSQEVKK
101: KVYVCPETSC VHHDPSRALG DLTGIKKHFC RKHGEKKWKC DKCSKRYAVV SDWKAHSKIC GTKEYKCDCG TLFSRRDSFM THRAFCDALA GESVRNHTHS
201: KKQSPEILTR KKPVPDPKPS LAAPVETQPA ITIKRPESPK TPREILQEAQ EPTGLNGVFF ESSSTSPSIY ASSCSQSLFA PSSSIEPISL GLSTSHGPSF
301: LCSTRFPAQP AMSATALLQK AAQMGAASSG GSLLRGLGIV SSTSPSMDSI VPNGLALGLP CGGESSSGLK ELMMGNSSVF GPKQTTLDFL GLGRAVGNGG
401: GPGSTLNGPR GGSIDALATF GSGEFSGNDI GRRTS
101: KVYVCPETSC VHHDPSRALG DLTGIKKHFC RKHGEKKWKC DKCSKRYAVV SDWKAHSKIC GTKEYKCDCG TLFSRRDSFM THRAFCDALA GESVRNHTHS
201: KKQSPEILTR KKPVPDPKPS LAAPVETQPA ITIKRPESPK TPREILQEAQ EPTGLNGVFF ESSSTSPSIY ASSCSQSLFA PSSSIEPISL GLSTSHGPSF
301: LCSTRFPAQP AMSATALLQK AAQMGAASSG GSLLRGLGIV SSTSPSMDSI VPNGLALGLP CGGESSSGLK ELMMGNSSVF GPKQTTLDFL GLGRAVGNGG
401: GPGSTLNGPR GGSIDALATF GSGEFSGNDI GRRTS
001: MPVDLDNSST VSGEASVSIS STGNQNPLPN STGKKKRNLP GMPDPESEVI ALSPKTLLAT NRFVCEICNK GFQRDQNLQL HRRGHNLPWK LRQKSNKEVK
101: KKVYVCPEVS CVHHDPSRAL GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTKEYKCDC GTLFSRRDSF ITHRAFCDAL AEENARSHHS
201: QSKKQNPEIL TRKNPVPNPV PAPVDTESAK IKSSSTLTIK QSESPKTPPE IVQEAPKPTS LNVVTSNGVF AGLFESSSAS PSIYTTSSSS KSLFASSSSI
301: EPISLGLSTS HGSSFLGSNR FHAQPAMSAT ALLQKAAQMG AASSGGSLLH GLGIVSSTST SIDAIVPHGL GLGLPCGGES SSGLKELMMG NSSVFGPKQT
401: TLDFLGLGRA VGNGNGPSNG LSTLVGGGTG IDMATTFGSG EFSGKDISRR KS
101: KKVYVCPEVS CVHHDPSRAL GDLTGIKKHF CRKHGEKKWK CDKCSKKYAV QSDWKAHSKI CGTKEYKCDC GTLFSRRDSF ITHRAFCDAL AEENARSHHS
201: QSKKQNPEIL TRKNPVPNPV PAPVDTESAK IKSSSTLTIK QSESPKTPPE IVQEAPKPTS LNVVTSNGVF AGLFESSSAS PSIYTTSSSS KSLFASSSSI
301: EPISLGLSTS HGSSFLGSNR FHAQPAMSAT ALLQKAAQMG AASSGGSLLH GLGIVSSTST SIDAIVPHGL GLGLPCGGES SSGLKELMMG NSSVFGPKQT
401: TLDFLGLGRA VGNGNGPSNG LSTLVGGGTG IDMATTFGSG EFSGKDISRR KS
Arabidopsis Description
IDD2Protein indeterminate-domain 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCQ6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.